RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 NDUFA7O95182 113 aa17.77■□□□□ 0.44
RBFOX1-206ENST00000535565 RNF152Q8N8N0 203 aa17.77■□□□□ 0.44
RBFOX1-206ENST00000535565 GATAD1Q8WUU5 269 aa17.77■□□□□ 0.44
RBFOX1-206ENST00000535565 HRH4Q9H3N8 390 aa17.77■□□□□ 0.44
RBFOX1-206ENST00000535565 SLC25A22Q9H936 323 aa17.77■□□□□ 0.44
RBFOX1-206ENST00000535565 GNB4Q9HAV0 340 aa17.77■□□□□ 0.44
RBFOX1-206ENST00000535565 PFDN2Q9UHV9 154 aa17.77■□□□□ 0.44
RBFOX1-206ENST00000535565 CUBNO60494 3623 aa17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 ELOA3CA0A087WX78 387 aaPredicted RBP17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 SEC14L6B5MCN3 397 aa17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 IGHV3-11P01762 117 aa17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 HBE1P02100 147 aa17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 SFT2D1Q8WV19 159 aa17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 RNF2Q99496 336 aa17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 CHRDL1Q9BU40 450 aa17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 DNAJC4Q9NNZ3 241 aa17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 DOK5Q9P104 306 aa17.76■□□□□ 0.43
RBFOX1-206ENST00000535565 RPLP1P05386 114 aaKnown RBP17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 ORM2P19652 201 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 ADMP35318 185 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 PLP1P60201 277 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 LYZP61626 148 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 ZNF726P1Q15940 193 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 C10orf113Q5VZT2 155 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 ZNF343Q6P1L6 599 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 OR5AU1Q8NGC0 362 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 OR4X2Q8NGF9 303 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 OR1B1Q8NGR6 318 aa17.75■□□□□ 0.43
RBFOX1-206ENST00000535565 MAP1LC3B2A6NCE7 125 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 LINC00862A6NCI5 91 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 HYPMO75409 117 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 OR5G3P0C626 314 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 ARL3P36405 182 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 RELQ04864 619 aaPredicted RBP17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 FAM78BQ5VT40 261 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 ZNF600Q6ZNG1 722 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 OR4F5Q8NH21 305 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 LINC01006Q8NI28 216 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 LYPD6BQ8NI32 183 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 MBD3L1Q8WWY6 194 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 RAB24Q969Q5 203 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 MAP1LC3BQ9GZQ8 125 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 IL4P05112 153 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 LCN15Q6UWW0 184 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 SSX7Q7RTT5 188 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 ZNF491Q8N8L2 437 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 MYOZ3Q8TDC0 251 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 TMEM37Q8WXS4 190 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 PBDC1Q9BVG4 233 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 MRPL32Q9BYC8 188 aaKnown RBP17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 FUT9Q9Y231 359 aa17.74■□□□□ 0.43
RBFOX1-206ENST00000535565 OR2C1O95371 312 aa17.73■□□□□ 0.43
RBFOX1-206ENST00000535565 KIAA0141Q14154 515 aaPredicted RBP17.73■□□□□ 0.43
RBFOX1-206ENST00000535565 RNF125Q96EQ8 232 aa17.73■□□□□ 0.43
RBFOX1-206ENST00000535565 UBE2E2Q96LR5 201 aa17.73■□□□□ 0.43
RBFOX1-206ENST00000535565 SEPSECSQ9HD40 501 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-206ENST00000535565 MED9Q9NWA0 146 aa17.73■□□□□ 0.43
RBFOX1-206ENST00000535565 TRAV1-1A0A0B4J248 108 aa17.72■□□□□ 0.43
RBFOX1-206ENST00000535565 A0A1B0GV50 99 aa17.72■□□□□ 0.43
RBFOX1-206ENST00000535565 PPP5D1E7EU14 171 aa17.72■□□□□ 0.43
RBFOX1-206ENST00000535565 HIGD1AQ9Y241 93 aa17.72■□□□□ 0.43
RBFOX1-206ENST00000535565 PUS1Q9Y606 427 aaKnown RBP eCLIP17.72■□□□□ 0.43
RBFOX1-206ENST00000535565 WI2-2373I1.2A0A1W2PRP0 233 aa17.71■□□□□ 0.43
RBFOX1-206ENST00000535565 ANKRD34BA5PLL1 514 aa17.71■□□□□ 0.43
RBFOX1-206ENST00000535565 NUDT19A8MXV4 375 aa17.71■□□□□ 0.43
RBFOX1-206ENST00000535565 PATE2Q6UY27 113 aa17.71■□□□□ 0.43
RBFOX1-206ENST00000535565 S100A7AQ86SG5 101 aa17.71■□□□□ 0.43
RBFOX1-206ENST00000535565 PEF1Q9UBV8 284 aaKnown RBP17.71■□□□□ 0.43
RBFOX1-206ENST00000535565 HMGB3O15347 200 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-206ENST00000535565 TAS2R45P59539 299 aa17.7■□□□□ 0.42
RBFOX1-206ENST00000535565 IL34Q6ZMJ4 242 aa17.7■□□□□ 0.42
RBFOX1-206ENST00000535565 LINC00305Q7Z4B0 112 aa17.7■□□□□ 0.42
RBFOX1-206ENST00000535565 FGF8P55075 233 aaPredicted RBP17.7■□□□□ 0.42
RBFOX1-206ENST00000535565 SPATA31B1PQ5VZV4 182 aa17.7■□□□□ 0.42
RBFOX1-206ENST00000535565 COMMD7Q86VX2 200 aa17.7■□□□□ 0.42
RBFOX1-206ENST00000535565 OR5B12Q96R08 314 aa17.7■□□□□ 0.42
RBFOX1-206ENST00000535565 TECRQ9NZ01 308 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-206ENST00000535565 NF1P21359 2839 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 IGHV3-35A0A0C4DH35 117 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 BMPR1BO00238 502 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 EIF3GO75821 320 aaKnown RBP eCLIP17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 TRBV12-3P01733 135 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 LGALS1P09382 135 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 STAG3L2P0CL84 134 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 STAG3L3P0CL85 134 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 MIR17HGQ75NE6 70 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 WIPF2Q8TF74 440 aaPredicted RBP17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 MARC2Q969Z3 335 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 UHRF2Q96PU4 802 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 RNF114Q9Y508 228 aa17.69■□□□□ 0.42
RBFOX1-206ENST00000535565 GGCTO75223 188 aaKnown RBP17.68■□□□□ 0.42
RBFOX1-206ENST00000535565 CXorf1O96002 111 aa17.68■□□□□ 0.42
RBFOX1-206ENST00000535565 S100A7P31151 101 aa17.68■□□□□ 0.42
RBFOX1-206ENST00000535565 KHDC3LQ587J8 217 aa17.68■□□□□ 0.42
RBFOX1-206ENST00000535565 TOMM20LQ6UXN7 152 aa17.68■□□□□ 0.42
RBFOX1-206ENST00000535565 MRPL27Q9P0M9 148 aaKnown RBP17.68■□□□□ 0.42
RBFOX1-206ENST00000535565 CLPSL1A2RUU4 121 aa17.67■□□□□ 0.42
RBFOX1-206ENST00000535565 C8orf88P0DMB2 117 aa17.67■□□□□ 0.42
RBFOX1-206ENST00000535565 USF2Q15853 346 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms