RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 NANOS2P60321 138 aaKnown RBP7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 TMEM41BQ5BJD5 291 aa7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 MORN3Q6PF18 240 aaPredicted RBP7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 LGI3Q8N145 548 aa7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 LRTM2Q8N967 370 aa7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 MCFD2Q8NI22 146 aa7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 DTD1Q8TEA8 209 aa7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 NARS2Q96I59 477 aaKnown RBP7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 MCUBQ9NWR8 336 aa7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 V9GYH0 126 aa7.3□□□□□ -1.24
CLSTN3-203ENST00000534830 DUXBA0A1W2PPF3 345 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 HELTA6NFD8 242 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 KNCNA6PVL3 124 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 IFNA10P01566 189 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 IL4P05112 153 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 RBMY1A1P0DJD3 496 aaKnown RBP7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 RBMY1CP0DJD4 496 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 RD3LP0DJH9 198 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 PSG1P11464 419 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 SLC25A6P12236 298 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 C4BPBP20851 252 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 GPX4P36969 197 aaPredicted RBP7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 RBMY1FQ15415 496 aaKnown RBP7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 ZNF79Q15937 498 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 TMEM128Q5BJH2 165 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 C11orf45Q8TAV5 145 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 DEDD2Q8WXF8 326 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 RAB40CQ96S21 281 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 MFFQ9GZY8 342 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 HRH4Q9H3N8 390 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 X6R8D5 127 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 DNAH11Q96DT5 4516 aa7.29□□□□□ -1.24
CLSTN3-203ENST00000534830 HSPG2P98160 4391 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 PRSS29PA6NIE9 313 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 FAM90A26D6RGX4 464 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 DEFB4AO15263 64 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 ANXA3P12429 323 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 EIF2B2P49770 351 aaKnown RBP7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 SRPXP78539 464 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 DHRS2Q13268 280 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 GAMTQ14353 236 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 SIGLEC15Q6ZMC9 328 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 CCDC190Q86UF4 302 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 TOMM5Q8N4H5 51 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 ACY3Q96HD9 319 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 RBM38Q9H0Z9 239 aaKnown RBP7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 NRN1Q9NPD7 142 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 FBXL17Q9UF56 701 aa7.28□□□□□ -1.24
CLSTN3-203ENST00000534830 IGKV1OR2-108A0A075B7D4 117 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 ELOA3CA0A087WX78 387 aaPredicted RBP7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 PIGBOS1A0A0B4J2F0 54 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 PRSS46E5RG02 174 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 H3BMM0 161 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 NOL3O60936 208 aaKnown RBP7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 IFNA4P05014 189 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 MIFP14174 115 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 FAUP35544 74 aaKnown RBP7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 ZNF90Q03938 601 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 ACTL10Q5JWF8 245 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 OR8G2PQ6IF36 304 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 OR51G1Q8NGK1 321 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 RNF125Q96EQ8 232 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 SLC25A21Q9BQT8 299 aaPredicted RBP7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 DNAH17Q9UFH2 4485 aa7.27□□□□□ -1.25
CLSTN3-203ENST00000534830 HERC1Q15751 4861 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 IGHV4-28A0A0C4DH34 117 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 SFT2D2O95562 160 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 TCTAP57738 103 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 AP3S2P59780 193 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 PYDC2Q56P42 97 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 PSMG4Q5JS54 123 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 THAP8Q8NA92 274 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 OR1S1Q8NH92 325 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 C2CD4CQ8TF44 421 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 TRGV9Q99603 122 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 APLNQ9ULZ1 77 aa7.26□□□□□ -1.25
CLSTN3-203ENST00000534830 C11orf94C9JXX5 98 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 SOCS3O14543 225 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 HLA-DRB4P13762 266 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 NUP62P37198 522 aaPredicted RBP7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 NKX2-1P43699 371 aaPredicted RBP7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 SNRPD3P62318 126 aaKnown RBP7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 PPP1R1AQ13522 171 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 C1orf194Q5T5A4 169 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 TMED4Q7Z7H5 227 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 ZNF575Q86XF7 245 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 WDR12Q9GZL7 423 aaKnown RBP7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 CLEC5AQ9NY25 188 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 TMED3Q9Y3Q3 217 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 HLA-DRB4X5D2U9 266 aa7.25□□□□□ -1.25
CLSTN3-203ENST00000534830 PKD1P98161 4303 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 ZFP92A6NM28 416 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 IGLL5B9A064 214 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 ZNF701M0R085 212 aaPredicted RBP7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 MED6O75586 246 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 IAPPP10997 89 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 RAB11AP62491 216 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 GDF5OSQ5U4N7 250 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 SLC35E1Q96K37 410 aa7.24□□□□□ -1.25
CLSTN3-203ENST00000534830 C17orf77Q96MU5 243 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms