RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ERGIC3Q9Y282 383 aa-0.96□□□□□ -2.56
COPB1-212ENST00000534771 SRCAPQ6ZRS2 3230 aa-0.96□□□□□ -2.56
COPB1-212ENST00000534771 A0A0C4DFX4 3053 aa-0.96□□□□□ -2.56
COPB1-212ENST00000534771 DYNC1H1Q14204 4646 aaKnown RBP-0.96□□□□□ -2.56
COPB1-212ENST00000534771 DNAH7Q8WXX0 4024 aa-0.96□□□□□ -2.56
COPB1-212ENST00000534771 ECM29Q5VYK3 1845 aa-0.96□□□□□ -2.56
COPB1-212ENST00000534771 MIA2Q96PC5 1412 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 NBEAQ8NFP9 2946 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 CCDC168Q8NDH2 2452 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 TRAV9-1A0A075B6T8 112 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 TRAV10A0A0B4J240 114 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 CST4P01036 141 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 TYMSP04818 313 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 MAP3K7CLP57077 242 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 HLA-DRB5Q30154 266 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 C18orf21Q32NC0 220 aaPredicted RBP-0.97□□□□□ -2.56
COPB1-212ENST00000534771 RBM48Q5RL73 367 aaKnown RBP-0.97□□□□□ -2.56
COPB1-212ENST00000534771 GLYATL3Q5SZD4 288 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 C1orf194Q5T5A4 169 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 PATE2Q6UY27 113 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 C4orf22Q6V702 233 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 Q6ZS49 121 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 HIST2H3AQ71DI3 136 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 OR52L1Q8NGH7 329 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 OR13C4Q8NGS5 318 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 OR2T35Q8NGX2 323 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 MRPL30Q8TCC3 161 aaKnown RBP-0.97□□□□□ -2.56
COPB1-212ENST00000534771 EEF1AKMT1Q8WVE0 214 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 RBP7Q96R05 134 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 WDR61Q9GZS3 305 aaKnown RBP-0.97□□□□□ -2.56
COPB1-212ENST00000534771 SLC39A9Q9NUM3 307 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 ENPP5Q9UJA9 477 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 PCTPQ9UKL6 214 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 LAMC3Q9Y6N6 1575 aa-0.97□□□□□ -2.56
COPB1-212ENST00000534771 ARHGEF11O15085 1522 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 RIF1Q5UIP0 2472 aaKnown RBP-0.98□□□□□ -2.57
COPB1-212ENST00000534771 HTTP42858 3142 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 CMYA5Q8N3K9 4069 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 UNC13CQ8NB66 2214 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 GOLGA6L7A0A1B0GV03 622 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 C7orf71A4D174 169 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 ERC2-IT1O76042 136 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 CXCL8P10145 99 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 GRK1Q15835 563 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 DNAL1Q4LDG9 190 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 FAM45BPQ6NSW5 357 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 ATP6V1C2Q8NEY4 427 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 OR5D14Q8NGL3 314 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 OR2T10Q8NGZ9 312 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 RNASEH2CQ8TDP1 164 aaKnown RBP-0.98□□□□□ -2.57
COPB1-212ENST00000534771 NAT14Q8WUY8 206 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 TCEAL2Q9H3H9 227 aaPredicted RBP-0.98□□□□□ -2.57
COPB1-212ENST00000534771 FAM96AQ9H5X1 160 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 MRPL27Q9P0M9 148 aaKnown RBP-0.98□□□□□ -2.57
COPB1-212ENST00000534771 TP73-AS1Q9UF72 201 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 MRM2Q9UI43 246 aaKnown RBP-0.98□□□□□ -2.57
COPB1-212ENST00000534771 BZW2Q9Y6E2 419 aaKnown RBP-0.98□□□□□ -2.57
COPB1-212ENST00000534771 PTPRFP10586 1907 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 PCNX1Q96RV3 2341 aa-0.98□□□□□ -2.57
COPB1-212ENST00000534771 APOBP04114 4563 aaKnown RBP-0.98□□□□□ -2.57
COPB1-212ENST00000534771 PKD1P98161 4303 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 MED1Q15648 1581 aaPredicted RBP-0.99□□□□□ -2.57
COPB1-212ENST00000534771 CCRL2O00421 344 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 ADAP1O75689 374 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 GADD45GO95257 159 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 HAND1O96004 215 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 SLC35E2BP0CK96 405 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 PTNP21246 168 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 CDC42P60953 191 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 GUK1Q16774 197 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 COQ5Q5HYK3 327 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 TRAPPC6BQ86SZ2 158 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 SLC51BQ86UW2 128 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 OR5AS1Q8N127 324 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 C10orf111Q8N326 155 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 LRRC25Q8N386 305 aaPredicted RBP-0.99□□□□□ -2.57
COPB1-212ENST00000534771 GDPD1Q8N9F7 314 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 Q8TAT8 98 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 H1FXQ92522 213 aaKnown RBP-0.99□□□□□ -2.57
COPB1-212ENST00000534771 CNBD2Q96M20 576 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 SERPINB11Q96P15 392 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 PARD6GQ9BYG4 376 aaPredicted RBP-0.99□□□□□ -2.57
COPB1-212ENST00000534771 PBOV1Q9GZY1 135 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 OR51I2Q9H344 312 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 BCL2L10Q9HD36 194 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 OSTCQ9NRP0 149 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 DKKL1Q9UK85 242 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 TP53TG1Q9Y2A0 90 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 UTP20O75691 2785 aaKnown RBP-0.99□□□□□ -2.57
COPB1-212ENST00000534771 MYH7BA7E2Y1 1941 aa-0.99□□□□□ -2.57
COPB1-212ENST00000534771 SPTBP11277 2137 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 DOPEY2Q9Y3R5 2298 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 SPTBN2O15020 2390 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 LRRK2Q5S007 2527 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 TOX3O15405 576 aaPredicted RBP-1□□□□□ -2.57
COPB1-212ENST00000534771 ATP6V1G2O95670 118 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 OTCP00480 354 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 IFNA10P01566 189 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 OR4E1P0C645 316 aa-1□□□□□ -2.57
COPB1-212ENST00000534771 ANP32AP39687 249 aaKnown RBP-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms