RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 SNRPGP15A8MWD9 76 aa13.95□□□□□ -0.18
LRRK1-210ENST00000534045 WRBO00258 174 aa13.95□□□□□ -0.18
LRRK1-210ENST00000534045 PITX3O75364 302 aa13.95□□□□□ -0.18
LRRK1-210ENST00000534045 UBE2MP61081 183 aaKnown RBP13.95□□□□□ -0.18
LRRK1-210ENST00000534045 SNRPD3P62318 126 aaKnown RBP13.95□□□□□ -0.18
LRRK1-210ENST00000534045 GAMTQ14353 236 aa13.95□□□□□ -0.18
LRRK1-210ENST00000534045 USF2Q15853 346 aaPredicted RBP13.95□□□□□ -0.18
LRRK1-210ENST00000534045 PPP1R14BQ96C90 147 aa13.95□□□□□ -0.18
LRRK1-210ENST00000534045 RNF125Q96EQ8 232 aa13.95□□□□□ -0.18
LRRK1-210ENST00000534045 NUPR2A6NF83 97 aa13.94□□□□□ -0.18
LRRK1-210ENST00000534045 SYNGR2O43760 224 aa13.94□□□□□ -0.18
LRRK1-210ENST00000534045 IFNA21P01568 189 aa13.94□□□□□ -0.18
LRRK1-210ENST00000534045 BAK1Q16611 211 aa13.94□□□□□ -0.18
LRRK1-210ENST00000534045 COQ8AQ8NI60 647 aa13.94□□□□□ -0.18
LRRK1-210ENST00000534045 MAGT1Q9H0U3 335 aa13.94□□□□□ -0.18
LRRK1-210ENST00000534045 ATF4P18848 351 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-210ENST00000534045 PSMG4Q5JS54 123 aa13.93□□□□□ -0.18
LRRK1-210ENST00000534045 ACTL10Q5JWF8 245 aa13.93□□□□□ -0.18
LRRK1-210ENST00000534045 GGNBP1Q5YKI7 109 aa13.93□□□□□ -0.18
LRRK1-210ENST00000534045 MORN3Q6PF18 240 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-210ENST00000534045 SIGLEC15Q6ZMC9 328 aa13.93□□□□□ -0.18
LRRK1-210ENST00000534045 DCANP1Q8TF63 244 aa13.93□□□□□ -0.18
LRRK1-210ENST00000534045 GLMPQ8WWB7 406 aa13.93□□□□□ -0.18
LRRK1-210ENST00000534045 NDUFA13Q9P0J0 144 aa13.93□□□□□ -0.18
LRRK1-210ENST00000534045 KLK5Q9Y337 293 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-210ENST00000534045 C9orf170A2RU37 121 aa13.92□□□□□ -0.18
LRRK1-210ENST00000534045 KNCNA6PVL3 124 aa13.92□□□□□ -0.18
LRRK1-210ENST00000534045 BUB3O43684 328 aa13.92□□□□□ -0.18
LRRK1-210ENST00000534045 NDUFB6O95139 128 aa13.92□□□□□ -0.18
LRRK1-210ENST00000534045 ZNF90Q03938 601 aa13.92□□□□□ -0.18
LRRK1-210ENST00000534045 C4orf46Q504U0 113 aa13.92□□□□□ -0.18
LRRK1-210ENST00000534045 TMEM41BQ5BJD5 291 aa13.92□□□□□ -0.18
LRRK1-210ENST00000534045 SPANXN5Q5MJ07 72 aa13.92□□□□□ -0.18
LRRK1-210ENST00000534045 NRN1Q9NPD7 142 aa13.92□□□□□ -0.18
LRRK1-210ENST00000534045 SPP1P10451 314 aa13.91□□□□□ -0.18
LRRK1-210ENST00000534045 LYZP61626 148 aa13.91□□□□□ -0.18
LRRK1-210ENST00000534045 OR2F1Q13607 317 aa13.91□□□□□ -0.18
LRRK1-210ENST00000534045 OR8G2PQ6IF36 304 aa13.91□□□□□ -0.18
LRRK1-210ENST00000534045 CEMP1Q6PRD7 247 aaPredicted RBP13.91□□□□□ -0.18
LRRK1-210ENST00000534045 RAB40CQ96S21 281 aa13.91□□□□□ -0.18
LRRK1-210ENST00000534045 C7orf50Q9BRJ6 194 aaKnown RBP13.91□□□□□ -0.18
LRRK1-210ENST00000534045 STRAPQ9Y3F4 350 aaKnown RBP13.91□□□□□ -0.18
LRRK1-210ENST00000534045 NUTF2P61970 127 aaKnown RBP13.9□□□□□ -0.18
LRRK1-210ENST00000534045 EWSR1Q01844 656 aaKnown RBP eCLIP13.9□□□□□ -0.18
LRRK1-210ENST00000534045 MFFQ9GZY8 342 aa13.9□□□□□ -0.18
LRRK1-210ENST00000534045 FBXL17Q9UF56 701 aa13.9□□□□□ -0.18
LRRK1-210ENST00000534045 FLVCR2Q9UPI3 526 aa13.9□□□□□ -0.18
LRRK1-210ENST00000534045 CSMD3Q7Z407 3707 aa13.89□□□□□ -0.19
LRRK1-210ENST00000534045 ADAP1O75689 374 aa13.89□□□□□ -0.19
LRRK1-210ENST00000534045 CFDP00746 253 aaPredicted RBP13.89□□□□□ -0.19
LRRK1-210ENST00000534045 OR4E1P0C645 316 aa13.89□□□□□ -0.19
LRRK1-210ENST00000534045 S100A7P31151 101 aa13.89□□□□□ -0.19
LRRK1-210ENST00000534045 ID1P41134 155 aa13.89□□□□□ -0.19
LRRK1-210ENST00000534045 CNPY1Q3B7I2 92 aa13.89□□□□□ -0.19
LRRK1-210ENST00000534045 TRPT1Q86TN4 253 aaKnown RBP13.89□□□□□ -0.19
LRRK1-210ENST00000534045 C11orf45Q8TAV5 145 aa13.89□□□□□ -0.19
LRRK1-210ENST00000534045 TRGV9Q99603 122 aa13.89□□□□□ -0.19
LRRK1-210ENST00000534045 SEPSECSQ9HD40 501 aaKnown RBP13.89□□□□□ -0.19
LRRK1-210ENST00000534045 NKX2-1P43699 371 aaPredicted RBP13.88□□□□□ -0.19
LRRK1-210ENST00000534045 AKR1C1Q04828 323 aa13.88□□□□□ -0.19
LRRK1-210ENST00000534045 OR8I2Q8N0Y5 310 aa13.88□□□□□ -0.19
LRRK1-210ENST00000534045 IGKV1D-37A0A075B6S9 117 aa13.87□□□□□ -0.19
LRRK1-210ENST00000534045 H3BP45 60 aa13.87□□□□□ -0.19
LRRK1-210ENST00000534045 IL7P13232 177 aa13.87□□□□□ -0.19
LRRK1-210ENST00000534045 ANXA7P20073 488 aaKnown RBP13.87□□□□□ -0.19
LRRK1-210ENST00000534045 C1orf194Q5T5A4 169 aa13.87□□□□□ -0.19
LRRK1-210ENST00000534045 PHLDA1Q8WV24 401 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-210ENST00000534045 LINC00052Q96N35 136 aa13.87□□□□□ -0.19
LRRK1-210ENST00000534045 PSENENQ9NZ42 101 aa13.87□□□□□ -0.19
LRRK1-210ENST00000534045 AGRNO00468 2067 aa13.86□□□□□ -0.19
LRRK1-210ENST00000534045 SMCO3A2RU48 225 aa13.86□□□□□ -0.19
LRRK1-210ENST00000534045 DEFB4AO15263 64 aa13.86□□□□□ -0.19
LRRK1-210ENST00000534045 LY6G6CO95867 125 aa13.86□□□□□ -0.19
LRRK1-210ENST00000534045 POLR2GP62487 172 aaKnown RBP eCLIP13.86□□□□□ -0.19
LRRK1-210ENST00000534045 ID3Q02535 119 aa13.86□□□□□ -0.19
LRRK1-210ENST00000534045 BPIFCQ8NFQ6 507 aa13.86□□□□□ -0.19
LRRK1-210ENST00000534045 C1QTNF4Q9BXJ3 329 aa13.86□□□□□ -0.19
LRRK1-210ENST00000534045 C11orf68Q9H3H3 251 aaKnown RBP13.86□□□□□ -0.19
LRRK1-210ENST00000534045 DYNC2H1Q8NCM8 4307 aaKnown RBP13.86□□□□□ -0.19
LRRK1-210ENST00000534045 SCGB1D2O95969 90 aa13.85□□□□□ -0.19
LRRK1-210ENST00000534045 THAP8Q8NA92 274 aa13.85□□□□□ -0.19
LRRK1-210ENST00000534045 SDHCQ99643 169 aaPredicted RBP13.85□□□□□ -0.19
LRRK1-210ENST00000534045 GSKIPQ9P0R6 139 aa13.85□□□□□ -0.19
LRRK1-210ENST00000534045 STARD9Q9P2P6 4700 aa13.85□□□□□ -0.19
LRRK1-210ENST00000534045 SSSCA1O60232 199 aa13.84□□□□□ -0.19
LRRK1-210ENST00000534045 ORM2P19652 201 aa13.84□□□□□ -0.19
LRRK1-210ENST00000534045 NANOS2P60321 138 aaKnown RBP13.84□□□□□ -0.19
LRRK1-210ENST00000534045 CLEC5AQ9NY25 188 aa13.84□□□□□ -0.19
LRRK1-210ENST00000534045 MIFP14174 115 aa13.83□□□□□ -0.2
LRRK1-210ENST00000534045 GALR1P47211 349 aa13.83□□□□□ -0.2
LRRK1-210ENST00000534045 IAH1Q2TAA2 248 aaPredicted RBP13.83□□□□□ -0.2
LRRK1-210ENST00000534045 SAMD13Q5VXD3 122 aa13.83□□□□□ -0.2
LRRK1-210ENST00000534045 TMEM147Q9BVK8 224 aa13.83□□□□□ -0.2
LRRK1-210ENST00000534045 SLC25A22Q9H936 323 aa13.83□□□□□ -0.2
LRRK1-210ENST00000534045 TBC1D24Q9ULP9 559 aa13.83□□□□□ -0.2
LRRK1-210ENST00000534045 IGKV1OR2-108A0A075B7D4 117 aa13.82□□□□□ -0.2
LRRK1-210ENST00000534045 LYRM1O43325 122 aa13.82□□□□□ -0.2
LRRK1-210ENST00000534045 IL5P05113 134 aa13.82□□□□□ -0.2
LRRK1-210ENST00000534045 ZNF846Q147U1 533 aa13.82□□□□□ -0.2
LRRK1-210ENST00000534045 ACOT7LQ6ZUV0 252 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms