RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 IGKV1D-12P01611 117 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 MST1P26927 711 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 TIMP3P35625 211 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 NMSQ5H8A3 153 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 DEPPQ9NTK1 212 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 LCTP09848 1927 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 TRGV11A0A075B6L2 103 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 PSMB11A5LHX3 300 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 GAGE12HA6NDE8 117 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 K7EP13 123 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 IGKV3-20P01619 116 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 RNASE4P34096 147 aaKnown RBP5.81□□□□□ -1.48
CTNND1-236ENST00000533667 SUPT4H1P63272 117 aaKnown RBP5.81□□□□□ -1.48
CTNND1-236ENST00000533667 TMEM14EPQ6UXP3 125 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 GGTLC1Q9BX51 225 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 AHCTF1Q8WYP5 2266 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 WDR90Q96KV7 1748 aa5.81□□□□□ -1.48
CTNND1-236ENST00000533667 E9PLN8 166 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 RNASE1P07998 156 aaKnown RBP5.8□□□□□ -1.48
CTNND1-236ENST00000533667 GZMBP10144 247 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 CRYBA4P53673 196 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 GNG5P63218 68 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 TMEM42Q69YG0 159 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 OR9G4Q8NGQ1 327 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 VKORC1Q9BQB6 163 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 DOCK3Q8IZD9 2030 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 J3KT08 172 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 CD55P08174 381 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 LYL1P12980 280 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 HERV-K104P63124 156 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 GGNQ86UU5 652 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 TMEM167AQ8TBQ9 72 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 COQ2Q96H96 371 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 C7orf69Q9H7B7 122 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 IGHV3-49A0A0A0MS15 119 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 IGHV3-66A0A0C4DH42 116 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 FNDC10F2Z333 226 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 ZNF418Q8TF45 676 aaPredicted RBP5.8□□□□□ -1.48
CTNND1-236ENST00000533667 LINC01587Q99440 93 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 TRGV9Q99603 122 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 PRSS22Q9GZN4 317 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 NYNRINQ9P2P1 1898 aaKnown RBP5.8□□□□□ -1.48
CTNND1-236ENST00000533667 IGHV3OR16-10A0A075B7F0 116 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 NDUFA3O95167 84 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 THBDP07204 575 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 PYYP10082 97 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 IFITM1P13164 125 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 CFPP27918 469 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 CHD5Q8TDI0 1954 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 CACNA1IQ9P0X4 2223 aa5.8□□□□□ -1.48
CTNND1-236ENST00000533667 HAX1O00165 279 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 IGHV1-46P01743 117 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 CMC4P56277 68 aaPredicted RBP5.79□□□□□ -1.48
CTNND1-236ENST00000533667 ITLN2Q8WWU7 325 aaPredicted RBP5.79□□□□□ -1.48
CTNND1-236ENST00000533667 ST6GALNAC6Q969X2 333 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 S4R3C0 116 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 BRWD3Q6RI45 1802 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 SVILO95425 2214 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 A0A087WV48 116 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 IGKV3OR2-268A0A0C4DH90 116 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 EFNA2O43921 213 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 IGKCP01834 107 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 ERVK11-1P61568 191 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 RHOGP84095 191 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 COLCA1Q6ZS62 124 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 RNF182Q8N6D2 247 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 IFI27L1Q96BM0 104 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 SPRR3Q9UBC9 169 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 V9GYY9 64 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 HEATR5BQ9P2D3 2071 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 CD7P09564 240 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 PLNP26678 52 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 FOXF2Q12947 444 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 MINOS1Q5TGZ0 78 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 MINOS1-NBL1R4GNA1 71 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 GBF1Q92538 1859 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 SCN8AQ9UQD0 1980 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 TRAV5A0A0B4J249 113 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 B5MCH6 92 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 SNAI2O43623 268 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 MMP23AO75900 390 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 ZNF585BQ52M93 769 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 FOXL2NBQ6ZUU3 175 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 LINC01551Q86U37 167 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 PNRC2Q9NPJ4 139 aaKnown RBP5.79□□□□□ -1.48
CTNND1-236ENST00000533667 PGPEP1Q9NXJ5 209 aa5.79□□□□□ -1.48
CTNND1-236ENST00000533667 TSSC4Q9Y5U2 329 aaPredicted RBP5.79□□□□□ -1.48
CTNND1-236ENST00000533667 TRBV7-9A0A0J9YWB2 115 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.78□□□□□ -1.48
CTNND1-236ENST00000533667 QRFPP83859 136 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 SPSB3Q6PJ21 355 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 LYPD1Q8N2G4 141 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 SPTA1P02549 2419 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 TIMM23O14925 209 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 HOXA3O43365 443 aaPredicted RBP5.78□□□□□ -1.48
CTNND1-236ENST00000533667 DSCR9P59020 149 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 FGFBP3Q8TAT2 258 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 VSIRQ9H7M9 311 aa5.78□□□□□ -1.48
CTNND1-236ENST00000533667 MBNL3Q9NUK0 354 aaKnown RBP5.78□□□□□ -1.48
CTNND1-236ENST00000533667 SCN2AQ99250 2005 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms