RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 C22orf34Q6ZV56 151 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 FMC1Q96HJ9 113 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 PLCE1Q9P212 2302 aa13.35□□□□□ -0.27
CTSB-228ENST00000533455 A8MWL6 223 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 CRXO43186 299 aaPredicted RBP13.34□□□□□ -0.27
CTSB-228ENST00000533455 LTAP01374 205 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 DIAPH2-AS1Q14236 149 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 SSX8Q7RTT4 187 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 SPATA12Q7Z6I5 190 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 PIP4P1Q86T03 277 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 C5orf17Q8NAS9 161 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 OR4F17Q8NGA8 305 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 CHCHD1Q96BP2 118 aaKnown RBP13.34□□□□□ -0.27
CTSB-228ENST00000533455 TMEM70Q9BUB7 260 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 GFRA4Q9GZZ7 299 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 GP9P14770 177 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 CCL8P80075 99 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 TCF24Q7RTU0 167 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 KIR3DL3Q8N743 410 aa13.34□□□□□ -0.27
CTSB-228ENST00000533455 IGHV1-69-2A0A0G2JMI3 117 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 IGLC7A0M8Q6 106 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 NBEAP1P0C6P0 100 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 CEACAM8P31997 349 aaPredicted RBP13.33□□□□□ -0.28
CTSB-228ENST00000533455 HINT1P49773 126 aaPredicted RBP13.33□□□□□ -0.28
CTSB-228ENST00000533455 PAX2Q02962 417 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 LINC00322Q6ZN03 302 aaPredicted RBP13.33□□□□□ -0.28
CTSB-228ENST00000533455 MUC15Q8N387 334 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 OR2D3Q8NGH3 330 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 OR1B1Q8NGR6 318 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 BLNKQ8WV28 456 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 COX11Q9Y6N1 276 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 SVILO95425 2214 aa13.33□□□□□ -0.28
CTSB-228ENST00000533455 C17orf100A8MU93 164 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 SLC25A17O43808 307 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 ORM2P19652 201 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 MC5RP33032 325 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 PLP1P60201 277 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 FAM27E3Q08E93 113 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 GTSF1Q8WW33 167 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 TPSG1Q9NRR2 321 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 ICE1Q9Y2F5 2266 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 FAM231BA6NCW3 169 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 TNFRSF13BO14836 293 aaPredicted RBP13.32□□□□□ -0.28
CTSB-228ENST00000533455 P01737 135 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 IGFL3Q6UXB1 125 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 C22orf15Q8WYQ4 148 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 CLEC5AQ9NY25 188 aa13.32□□□□□ -0.28
CTSB-228ENST00000533455 DSPP15924 2871 aaKnown RBP13.32□□□□□ -0.28
CTSB-228ENST00000533455 PRRC2CQ9Y520 2896 aaKnown RBP13.32□□□□□ -0.28
CTSB-228ENST00000533455 PPIAL4EA0A075B759 164 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 PPIAL4DF5H284 164 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 TCRAP04437 139 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 FTH1P19P0C7X4 201 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 PPIAL4FP0DN26 164 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 LGALS7P47929 136 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 DLX6P56179 175 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 RUSC1-AS1Q66K80 236 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 TMEM116Q8NCL8 245 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 ST20Q9HBF5 79 aa13.31□□□□□ -0.28
CTSB-228ENST00000533455 NPIPB6E9PJ23 425 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 TMEM178BH3BS89 294 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 UNQ5815/PRO19632Q6UWF5 114 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
CTSB-228ENST00000533455 TEX45Q8NA69 505 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 ZNF738Q8NE65 137 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 SGK494Q96LW2 274 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 RPH3ALQ9UNE2 315 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 IGHV1-24A0A0C4DH33 117 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 OR4C46A6NHA9 309 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 CCL25O15444 150 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 NDUFB3O43676 98 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 ADIPOQQ15848 244 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 TMEM108Q6UXF1 575 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 H1FXQ92522 213 aaKnown RBP13.3□□□□□ -0.28
CTSB-228ENST00000533455 Q9H3A6 140 aa13.3□□□□□ -0.28
CTSB-228ENST00000533455 ARFGEF3Q5TH69 2177 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 SH2D7A6NKC9 451 aaPredicted RBP13.29□□□□□ -0.28
CTSB-228ENST00000533455 PTTG1IPP53801 180 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 UBE2V1Q13404 147 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 LRRC10Q5BKY1 277 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 C8orf46Q8TAG6 207 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 RITA1Q96K30 269 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 PGLYRP4Q96LB8 373 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 ASPMQ8IZT6 3477 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 SYS1-DBNDD2H3BUS1 97 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 HCP5Q6MZN7 132 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 IGF2-ASQ6U949 168 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 Q6ZS92 163 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 Q86TA4 180 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 NDFIP1Q9BT67 221 aa13.29□□□□□ -0.28
CTSB-228ENST00000533455 DMXL1Q9Y485 3027 aa13.28□□□□□ -0.28
CTSB-228ENST00000533455 LOC102724200A0A096LPH7 203 aaPredicted RBP13.28□□□□□ -0.28
CTSB-228ENST00000533455 CRYGBP07316 175 aa13.28□□□□□ -0.28
CTSB-228ENST00000533455 LOXP28300 417 aaPredicted RBP13.28□□□□□ -0.28
CTSB-228ENST00000533455 RPL27AP46776 148 aaKnown RBP13.28□□□□□ -0.28
CTSB-228ENST00000533455 C16orf54Q6UWD8 224 aa13.28□□□□□ -0.28
CTSB-228ENST00000533455 LYPD2Q6UXB3 125 aa13.28□□□□□ -0.28
CTSB-228ENST00000533455 DEFB124Q8NES8 71 aa13.28□□□□□ -0.28
CTSB-228ENST00000533455 DAZAP1Q96EP5 407 aaKnown RBP13.28□□□□□ -0.28
CTSB-228ENST00000533455 OTORQ9NRC9 128 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms