RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 SPP1P10451 314 aa17.16■□□□□ 0.34
SMPD1-209ENST00000533196 VAMP1P23763 118 aa17.16■□□□□ 0.34
SMPD1-209ENST00000533196 DHRS2Q13268 280 aa17.16■□□□□ 0.34
SMPD1-209ENST00000533196 TRPT1Q86TN4 253 aaKnown RBP17.16■□□□□ 0.34
SMPD1-209ENST00000533196 OR51G1Q8NGK1 321 aa17.16■□□□□ 0.34
SMPD1-209ENST00000533196 SLC35E1Q96K37 410 aa17.16■□□□□ 0.34
SMPD1-209ENST00000533196 BUB3O43684 328 aa17.15■□□□□ 0.34
SMPD1-209ENST00000533196 MED6O75586 246 aa17.15■□□□□ 0.34
SMPD1-209ENST00000533196 PSG1P11464 419 aa17.15■□□□□ 0.34
SMPD1-209ENST00000533196 UBE2MP61081 183 aaKnown RBP17.15■□□□□ 0.34
SMPD1-209ENST00000533196 RAB11AP62491 216 aa17.15■□□□□ 0.34
SMPD1-209ENST00000533196 CIB3Q96Q77 187 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-209ENST00000533196 FABP1P07148 127 aa17.14■□□□□ 0.33
SMPD1-209ENST00000533196 ZNF688P0C7X2 276 aa17.14■□□□□ 0.33
SMPD1-209ENST00000533196 GAMTQ14353 236 aa17.14■□□□□ 0.33
SMPD1-209ENST00000533196 OR8G2PQ6IF36 304 aa17.14■□□□□ 0.33
SMPD1-209ENST00000533196 CENPSQ8N2Z9 138 aa17.14■□□□□ 0.33
SMPD1-209ENST00000533196 LINC00476Q8WZB0 136 aa17.14■□□□□ 0.33
SMPD1-209ENST00000533196 RNF125Q96EQ8 232 aa17.14■□□□□ 0.33
SMPD1-209ENST00000533196 MFFQ9GZY8 342 aa17.14■□□□□ 0.33
SMPD1-209ENST00000533196 RPP30P78346 268 aaKnown RBP17.13■□□□□ 0.33
SMPD1-209ENST00000533196 PPP1R1AQ13522 171 aa17.13■□□□□ 0.33
SMPD1-209ENST00000533196 SIGLEC15Q6ZMC9 328 aa17.13■□□□□ 0.33
SMPD1-209ENST00000533196 SRRQ9GZT4 340 aa17.13■□□□□ 0.33
SMPD1-209ENST00000533196 NRN1Q9NPD7 142 aa17.13■□□□□ 0.33
SMPD1-209ENST00000533196 NAP1L6A6NFF2 107 aa17.12■□□□□ 0.33
SMPD1-209ENST00000533196 ZFP92A6NM28 416 aa17.12■□□□□ 0.33
SMPD1-209ENST00000533196 SNRPD3P62318 126 aaKnown RBP17.12■□□□□ 0.33
SMPD1-209ENST00000533196 EPPK1P58107 5090 aaKnown RBP17.11■□□□□ 0.33
SMPD1-209ENST00000533196 C11orf45Q8TAV5 145 aa17.11■□□□□ 0.33
SMPD1-209ENST00000533196 PHLDA1Q8WV24 401 aaPredicted RBP17.11■□□□□ 0.33
SMPD1-209ENST00000533196 IGKV1D-37A0A075B6S9 117 aa17.1■□□□□ 0.33
SMPD1-209ENST00000533196 INPP1P49441 399 aa17.1■□□□□ 0.33
SMPD1-209ENST00000533196 PSMG4Q5JS54 123 aa17.1■□□□□ 0.33
SMPD1-209ENST00000533196 ACTL10Q5JWF8 245 aa17.1■□□□□ 0.33
SMPD1-209ENST00000533196 KNCNA6PVL3 124 aa17.09■□□□□ 0.33
SMPD1-209ENST00000533196 SYNGR2O43760 224 aa17.09■□□□□ 0.33
SMPD1-209ENST00000533196 GIG44P09565 113 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-209ENST00000533196 IAPPP10997 89 aa17.09■□□□□ 0.33
SMPD1-209ENST00000533196 TRIQKQ629K1 86 aa17.09■□□□□ 0.33
SMPD1-209ENST00000533196 RAB40CQ96S21 281 aa17.09■□□□□ 0.33
SMPD1-209ENST00000533196 TRGV9Q99603 122 aa17.09■□□□□ 0.33
SMPD1-209ENST00000533196 FBXL17Q9UF56 701 aa17.09■□□□□ 0.33
SMPD1-209ENST00000533196 SNRPGP15A8MWD9 76 aa17.08■□□□□ 0.32
SMPD1-209ENST00000533196 CFDP00746 253 aaPredicted RBP17.08■□□□□ 0.32
SMPD1-209ENST00000533196 HOXB5P09067 269 aa17.08■□□□□ 0.32
SMPD1-209ENST00000533196 C1orf194Q5T5A4 169 aa17.08■□□□□ 0.32
SMPD1-209ENST00000533196 PBDC1Q9BVG4 233 aa17.08■□□□□ 0.32
SMPD1-209ENST00000533196 NDUFB6O95139 128 aa17.07■□□□□ 0.32
SMPD1-209ENST00000533196 MIFP14174 115 aa17.07■□□□□ 0.32
SMPD1-209ENST00000533196 ZNF90Q03938 601 aa17.07■□□□□ 0.32
SMPD1-209ENST00000533196 GGNBP1Q5YKI7 109 aa17.07■□□□□ 0.32
SMPD1-209ENST00000533196 THAP8Q8NA92 274 aa17.07■□□□□ 0.32
SMPD1-209ENST00000533196 BIRC6Q9NR09 4857 aa17.07■□□□□ 0.32
SMPD1-209ENST00000533196 ZNF705EA8MWA4 302 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-209ENST00000533196 LY6G6CO95867 125 aa17.06■□□□□ 0.32
SMPD1-209ENST00000533196 NUTF2P61970 127 aaKnown RBP17.06■□□□□ 0.32
SMPD1-209ENST00000533196 BAK1Q16611 211 aa17.06■□□□□ 0.32
SMPD1-209ENST00000533196 Q8NAQ8 132 aa17.06■□□□□ 0.32
SMPD1-209ENST00000533196 C1QTNF4Q9BXJ3 329 aa17.06■□□□□ 0.32
SMPD1-209ENST00000533196 HRH4Q9H3N8 390 aa17.06■□□□□ 0.32
SMPD1-209ENST00000533196 PAIP2BQ9ULR5 123 aaKnown RBP17.06■□□□□ 0.32
SMPD1-209ENST00000533196 C9orf170A2RU37 121 aa17.05■□□□□ 0.32
SMPD1-209ENST00000533196 C4BPBP20851 252 aa17.05■□□□□ 0.32
SMPD1-209ENST00000533196 NKX2-1P43699 371 aaPredicted RBP17.05■□□□□ 0.32
SMPD1-209ENST00000533196 LYZP61626 148 aa17.05■□□□□ 0.32
SMPD1-209ENST00000533196 C7orf50Q9BRJ6 194 aaKnown RBP17.05■□□□□ 0.32
SMPD1-209ENST00000533196 MAGT1Q9H0U3 335 aa17.05■□□□□ 0.32
SMPD1-209ENST00000533196 CENPXA8MT69 81 aa17.04■□□□□ 0.32
SMPD1-209ENST00000533196 PRSS46E5RG02 174 aa17.04■□□□□ 0.32
SMPD1-209ENST00000533196 WRBO00258 174 aa17.04■□□□□ 0.32
SMPD1-209ENST00000533196 ID1P41134 155 aa17.04■□□□□ 0.32
SMPD1-209ENST00000533196 NANOS2P60321 138 aaKnown RBP17.04■□□□□ 0.32
SMPD1-209ENST00000533196 CNPY1Q3B7I2 92 aa17.04■□□□□ 0.32
SMPD1-209ENST00000533196 CSNK1G2-AS1Q8NCQ2 148 aa17.04■□□□□ 0.32
SMPD1-209ENST00000533196 COQ8AQ8NI60 647 aa17.04■□□□□ 0.32
SMPD1-209ENST00000533196 SLC45A2Q9UMX9 530 aa17.04■□□□□ 0.32
SMPD1-209ENST00000533196 IGKV1OR2-108A0A075B7D4 117 aa17.03■□□□□ 0.32
SMPD1-209ENST00000533196 ID3Q02535 119 aa17.03■□□□□ 0.32
SMPD1-209ENST00000533196 SAMD13Q5VXD3 122 aa17.03■□□□□ 0.32
SMPD1-209ENST00000533196 STRAPQ9Y3F4 350 aaKnown RBP17.03■□□□□ 0.32
SMPD1-209ENST00000533196 H3BMM0 161 aa17.02■□□□□ 0.32
SMPD1-209ENST00000533196 IFNA21P01568 189 aa17.02■□□□□ 0.32
SMPD1-209ENST00000533196 HLA-DRB4P13762 266 aa17.02■□□□□ 0.32
SMPD1-209ENST00000533196 S100A7P31151 101 aa17.02■□□□□ 0.32
SMPD1-209ENST00000533196 TCTAP57738 103 aa17.02■□□□□ 0.32
SMPD1-209ENST00000533196 TBC1D24Q9ULP9 559 aa17.02■□□□□ 0.32
SMPD1-209ENST00000533196 HLA-DRB4X5D2U9 266 aa17.02■□□□□ 0.32
SMPD1-209ENST00000533196 X6R8D5 127 aa17.02■□□□□ 0.32
SMPD1-209ENST00000533196 IGHV4-28A0A0C4DH34 117 aa17.01■□□□□ 0.31
SMPD1-209ENST00000533196 C11orf94C9JXX5 98 aa17.01■□□□□ 0.31
SMPD1-209ENST00000533196 DEFB4AO15263 64 aa17.01■□□□□ 0.31
SMPD1-209ENST00000533196 OR4E1P0C645 316 aa17.01■□□□□ 0.31
SMPD1-209ENST00000533196 PSMB3P49720 205 aa17.01■□□□□ 0.31
SMPD1-209ENST00000533196 OR2F1Q13607 317 aa17.01■□□□□ 0.31
SMPD1-209ENST00000533196 SPANXN5Q5MJ07 72 aa17.01■□□□□ 0.31
SMPD1-209ENST00000533196 PPP1R14BQ96C90 147 aa17.01■□□□□ 0.31
SMPD1-209ENST00000533196 SDHCQ99643 169 aaPredicted RBP17.01■□□□□ 0.31
SMPD1-209ENST00000533196 ADAP1O75689 374 aa17■□□□□ 0.31
SMPD1-209ENST00000533196 LGALS9CQ6DKI2 356 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms