RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 I3L2K1 104 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 CORTO00230 105 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 CYB5BO43169 146 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 NDUFB8O95169 186 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 MT-CO2P00403 227 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 FGF7P21781 194 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 ATP6V0CP27449 155 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 OPRK1P41145 380 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 EXOSC2Q13868 293 aaKnown RBP8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 KLK9Q2XQG4 91 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 ETFRF1Q6IPR1 90 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 BTNL8Q6UX41 500 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 ALKAL2Q6UX46 152 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 SLC16A13Q7RTY0 426 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 SLC35E1Q96K37 410 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 OR5B12Q96R08 314 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 PARD6GQ9BYG4 376 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 NPVFQ9HCQ7 196 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 ZNF355PQ9NSJ1 428 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 KLK9Q9UKQ9 250 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 WDR83OSQ9Y284 106 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 RFNGQ9Y644 331 aa8.59□□□□□ -1.03
TRAPPC4-213ENST00000533149 RYR1P21817 5038 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 LINC01619G3V211 115 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 K7EIM0 57 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 SOX15O60248 233 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 IFNA7P01567 189 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 HIST1H1BP16401 226 aaKnown RBP8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 KIAA0141Q14154 515 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 TMEM144Q7Z5S9 345 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 RPP25LQ8N5L8 163 aaKnown RBP8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 TMED6Q8WW62 240 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 NPIPB3Q92617 1050 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 GNPNAT1Q96EK6 184 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 PHYHIPLQ96FC7 376 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 ACY3Q96HD9 319 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 MRPL36Q9P0J6 103 aaKnown RBP8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 FBXL7Q9UJT9 491 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 ALMS1Q8TCU4 4167 aa8.58□□□□□ -1.04
TRAPPC4-213ENST00000533149 OR2J3O76001 311 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 SEC11BP0C7V7 166 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 SPP1P10451 314 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 PPIFP30405 207 aaKnown RBP8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 RND2P52198 227 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 SLURP1P55000 103 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 AKR1C1Q04828 323 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 EIF5AL1Q6IS14 154 aaKnown RBP8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 ZNF767PQ75MW2 155 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 OR2G3Q8NGZ4 309 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 SCARB1Q8WTV0 552 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 MS4A10Q96PG2 267 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 ELOVL1Q9BW60 279 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 SH3BGRL3Q9H299 93 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 SLC25A32Q9H2D1 315 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 KLK15Q9H2R5 256 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 RETNQ9HD89 108 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 THYN1Q9P016 225 aa8.57□□□□□ -1.04
TRAPPC4-213ENST00000533149 TRBV9A0A0B4J1U6 114 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 RGS13O14921 159 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 MPDU1O75352 247 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 IGLV1-51P01701 117 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 RHOGP84095 191 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 TEPPQ6URK8 271 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 GTSCR1Q86UQ5 136 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 ZNF709Q8N972 641 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 MGST2Q99735 147 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 FAM110AQ9BQ89 295 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 RSG1Q9BU20 258 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 UBQLN2Q9UHD9 624 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 S4R3C0 116 aa8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-213ENST00000533149 IGKV1OR2-108A0A075B7D4 117 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 AGPAT2O15120 278 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 BRI3O95415 125 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 IGLV1-40P01703 118 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 OR10J1P30954 320 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 CAMLGP49069 296 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 RAB9AP51151 201 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 MFAP4P55083 255 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 DEFA5Q01523 94 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 RAB31Q13636 194 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 FAM74A1Q5RGS3 127 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 THAP8Q8NA92 274 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 NECAP1Q8NC96 275 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 TMEM116Q8NCL8 245 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 OR4X1Q8NH49 305 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 VN1R17PQ8TDU5 208 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 PSMG3Q9BT73 122 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 NPCDR1Q9BY65 106 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 SLC45A2Q9UMX9 530 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 TIMM9Q9Y5J7 89 aa8.55□□□□□ -1.04
TRAPPC4-213ENST00000533149 IGKV1D-37A0A075B6S9 117 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 MFSD2BA6NFX1 497 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 C17orf112F2Z3M2 114 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 H3BUA1 57 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 IGHV3-23P01764 117 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 TRGV3P03979 118 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 ATP5G2Q06055 141 aa8.54□□□□□ -1.04
TRAPPC4-213ENST00000533149 TMEM182Q6ZP80 229 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms