RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, human

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF3A-215	ENST00000533145	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	ANKRD34B	A5PLL1	514 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	PPP5D1	E7EU14	171 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	TSPAN15	O95858	294 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	B2M	P61769	119 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	TEX261	Q6UWH6	196 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	NDUFA11	Q86Y39	141 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	GPHB5	Q86YW7	130 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	STPG3	Q8N7X2	389 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	OR51G1	Q8NGK1	321 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	TMEM158	Q8WZ71	300 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	C19orf24	Q9BVV8	132 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	SH3BGRL3	Q9H299	93 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	SLC39A9	Q9NUM3	307 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	RFNG	Q9Y644	331 aa		10.84	□□□□□ -0.67
HIF3A-215	ENST00000533145	ADARB2-AS1	A8MUL3	147 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	UMAD1	C9J7I0	102 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	NDUFA4	O00483	81 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	YIF1A	O95070	293 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	MB	P02144	154 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	GATA2	P23769	480 aa	Predicted RBP	10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145		Q6ZRG5	221 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	C18orf65	Q6ZTR6	163 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	KLHL30-AS1	Q8NEE0	82 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	OR5B12	Q96R08	314 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	CITED1	Q99966	193 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	PLA2G2E	Q9NZK7	142 aa		10.83	□□□□□ -0.68
HIF3A-215	ENST00000533145	IGHV4OR15-8	A0A075B7B6	117 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145		A0A087WW49	117 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	M6PR	P20645	277 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	ZP3	P21754	424 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	SULT1A2	P50226	295 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	IFITM2	Q01629	132 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	FFAR4	Q5NUL3	377 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	TOMM20L	Q6UXN7	152 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	C11orf44	Q8N8P7	122 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	ZNF680	Q8NEM1	530 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	TMED6	Q8WW62	240 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	ZFAND3	Q9H8U3	227 aa		10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	MRPL27	Q9P0M9	148 aa	Known RBP	10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
HIF3A-215	ENST00000533145	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	LINC01619	G3V211	115 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	IFNA7	P01567	189 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	RAB5C	P51148	216 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	FAM106A	Q4KMX7	169 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	KHDC1L	Q5JSQ8	128 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	PATE2	Q6UY27	113 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	OR11H1	Q8NG94	326 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	OR1L4	Q8NGR5	311 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	OR1N2	Q8NGR9	330 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	GATAD1	Q8WUU5	269 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	RNF125	Q96EQ8	232 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	PFDN5	Q99471	154 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	ZNF747	Q9BV97	191 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	DNAJC4	Q9NNZ3	241 aa		10.81	□□□□□ -0.68
HIF3A-215	ENST00000533145	NUDT19	A8MXV4	375 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145		K7EMT4	169 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	LGALS9	O00182	355 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	HYPM	O75409	117 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	IL4	P05112	153 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	FHL3	Q13643	280 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	KLF5	Q13887	457 aa	Predicted RBP	10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	RPEL1	Q2QD12	228 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	TMEM41B	Q5BJD5	291 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	AKR1C8P	Q5T2L2	129 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	ALKAL2	Q6UX46	152 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	DPPA3	Q6W0C5	159 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	C8orf86	Q6ZUL3	223 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	TMEM37	Q8WXS4	190 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	DPF1	Q92782	380 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	RNF2	Q99496	336 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	VSIR	Q9H7M9	311 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	RPRM	Q9NS64	109 aa		10.8	□□□□□ -0.68
HIF3A-215	ENST00000533145	CCL24	O00175	119 aa		10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	OR5G3	P0C626	314 aa		10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	HOXD3	P31249	432 aa	Predicted RBP	10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	MYCNOS	P40205	109 aa		10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	ELL	P55199	621 aa	Predicted RBP	10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	REC114	Q7Z4M0	266 aa		10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	S100A7A	Q86SG5	101 aa		10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	RPP25L	Q8N5L8	163 aa	Known RBP	10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	RNF141	Q8WVD5	230 aa		10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	TMEM190	Q8WZ59	177 aa		10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	RCC1L	Q96I51	464 aa	Known RBP	10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	RAX2	Q96IS3	184 aa		10.79	□□□□□ -0.68
HIF3A-215	ENST00000533145	COL6A5	A8TX70	2615 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	FBN1	P35555	2871 aa	Known RBP	10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	IGHV3-35	A0A0C4DH35	117 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	SEC14L6	B5MCN3	397 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	ORM2	P19652	201 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	S100A7	P31151	101 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	LYZ	P61626	148 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	USF2	Q15853	346 aa	Predicted RBP	10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	DEFB136	Q30KP8	78 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	GCSAML	Q5JQS6	135 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	C10orf113	Q5VZT2	155 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	HIST2H2BD	Q6DRA6	164 aa		10.78	□□□□□ -0.68
HIF3A-215	ENST00000533145	ZNF767P	Q75MW2	155 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms