RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ADMP35318 185 aa12.53□□□□□ -0.4
PKP3-209ENST00000533069 AP2S1P53680 142 aaPredicted RBP12.53□□□□□ -0.4
PKP3-209ENST00000533069 ATP6V1FQ16864 119 aa12.53□□□□□ -0.4
PKP3-209ENST00000533069 SPINK9Q5DT21 86 aa12.53□□□□□ -0.4
PKP3-209ENST00000533069 ETFRF1Q6IPR1 90 aa12.53□□□□□ -0.4
PKP3-209ENST00000533069 BTNL8Q6UX41 500 aa12.53□□□□□ -0.4
PKP3-209ENST00000533069 SLC16A13Q7RTY0 426 aa12.53□□□□□ -0.4
PKP3-209ENST00000533069 OR11H4Q8NGC9 324 aa12.53□□□□□ -0.4
PKP3-209ENST00000533069 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
PKP3-209ENST00000533069 RPS10-NUDT3A0A1W2PQS6 291 aa12.52□□□□□ -0.41
PKP3-209ENST00000533069 FNDC10F2Z333 226 aa12.52□□□□□ -0.41
PKP3-209ENST00000533069 K7EMT4 169 aa12.52□□□□□ -0.41
PKP3-209ENST00000533069 CTSGP08311 255 aa12.52□□□□□ -0.41
PKP3-209ENST00000533069 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.41
PKP3-209ENST00000533069 EIF2B2P49770 351 aaKnown RBP12.52□□□□□ -0.41
PKP3-209ENST00000533069 EWSR1Q01844 656 aaKnown RBP eCLIP12.52□□□□□ -0.417e-6■■■□□ 16.7
PKP3-209ENST00000533069 PVRIGQ6DKI7 326 aa12.52□□□□□ -0.41
PKP3-209ENST00000533069 RBPMS2Q6ZRY4 209 aaKnown RBP12.52□□□□□ -0.41
PKP3-209ENST00000533069 KCNRGQ8N5I3 272 aa12.52□□□□□ -0.41
PKP3-209ENST00000533069 HSPB11Q9Y547 144 aa12.52□□□□□ -0.41
PKP3-209ENST00000533069 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 FAM24AA6NFZ4 105 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 C15orf62A8K5M9 175 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 H3BP45 60 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 DFFBO76075 338 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 IFNA4P05014 189 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 CD7P09564 240 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 EIF5AP63241 154 aaKnown RBP12.51□□□□□ -0.41
PKP3-209ENST00000533069 HAGHQ16775 308 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 OR1S2Q8NGQ3 325 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 SPATA25Q9BR10 227 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
PKP3-209ENST00000533069 KANTRA0A1W2PQU2 76 aa12.5□□□□□ -0.41
PKP3-209ENST00000533069 OR11H12B2RN74 326 aa12.5□□□□□ -0.41
PKP3-209ENST00000533069 GNG7O60262 68 aa12.5□□□□□ -0.41
PKP3-209ENST00000533069 METTL15P1P0C7V9 234 aa12.5□□□□□ -0.41
PKP3-209ENST00000533069 GPX4P36969 197 aaPredicted RBP12.5□□□□□ -0.41
PKP3-209ENST00000533069 NPBWR1P48145 328 aa12.5□□□□□ -0.41
PKP3-209ENST00000533069 ZNF266Q14584 549 aa12.5□□□□□ -0.41
PKP3-209ENST00000533069 PAIP2BQ9ULR5 123 aaKnown RBP12.5□□□□□ -0.41
PKP3-209ENST00000533069 IGSF23A1L1A6 192 aa12.49□□□□□ -0.41
PKP3-209ENST00000533069 BOLA2-SMG1P6H3BVE0 249 aa12.49□□□□□ -0.41
PKP3-209ENST00000533069 DLK1P80370 383 aa12.49□□□□□ -0.41
PKP3-209ENST00000533069 LAMTOR1Q6IAA8 161 aa12.49□□□□□ -0.41
PKP3-209ENST00000533069 LINC00322Q6ZN03 302 aaPredicted RBP12.49□□□□□ -0.41
PKP3-209ENST00000533069 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
PKP3-209ENST00000533069 C9orf62Q8N4C0 152 aa12.49□□□□□ -0.41
PKP3-209ENST00000533069 DEFB125Q8N687 156 aa12.49□□□□□ -0.41
PKP3-209ENST00000533069 SPAG8Q99932 426 aaPredicted RBP12.49□□□□□ -0.41
PKP3-209ENST00000533069 ARPC5LQ9BPX5 153 aa12.49□□□□□ -0.41
PKP3-209ENST00000533069 SRD5A3Q9H8P0 318 aa12.49□□□□□ -0.41
PKP3-209ENST00000533069 BORCS7-ASMTA0A0B4J1R7 106 aa12.48□□□□□ -0.41
PKP3-209ENST00000533069 TSPAN4O14817 238 aa12.48□□□□□ -0.41
PKP3-209ENST00000533069 BCL2L11O43521 198 aa12.48□□□□□ -0.41
PKP3-209ENST00000533069 SCGB2A1O75556 95 aa12.48□□□□□ -0.41
PKP3-209ENST00000533069 JTBO76095 146 aa12.48□□□□□ -0.41
PKP3-209ENST00000533069 SLC38A11Q08AI6 406 aa12.48□□□□□ -0.41
PKP3-209ENST00000533069 LGALSLQ3ZCW2 172 aaPredicted RBP12.48□□□□□ -0.41
PKP3-209ENST00000533069 ARL6Q9H0F7 186 aa12.48□□□□□ -0.41
PKP3-209ENST00000533069 SELENOKQ9Y6D0 94 aa12.48□□□□□ -0.41
PKP3-209ENST00000533069 HUWE1Q7Z6Z7 4374 aaKnown RBP12.47□□□□□ -0.41
PKP3-209ENST00000533069 PMS2P5A8MQ11 134 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 C3orf84H3BNL1 204 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 CST7O76096 145 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 YIF1AO95070 293 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 IGHV3-48P01763 117 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 CXCL2P19875 107 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 NHLH2Q02577 135 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 OR8G2PQ6IF36 304 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 TMUB2Q71RG4 321 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 OR5C1Q8NGR4 320 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 ATP5SQ99766 215 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 TMEM147Q9BVK8 224 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 PARD6GQ9BYG4 376 aaPredicted RBP12.47□□□□□ -0.41
PKP3-209ENST00000533069 WFDC10AQ9H1F0 79 aa12.47□□□□□ -0.41
PKP3-209ENST00000533069 IGHV3OR16-8A0A075B7F1 116 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 PRSS46E5RG02 174 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 MPDU1O75352 247 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 IFNA5P01569 189 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 OPRK1P41145 380 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 VWC2Q2TAL6 325 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 TMEM217Q8N7C4 229 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 TMEM170AQ8WVE7 144 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 ZNF414Q96IQ9 312 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 SLC35E1Q96K37 410 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 CITED4Q96RK1 184 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 GINS3Q9BRX5 216 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 UQCC1Q9NVA1 299 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 FBXL17Q9UF56 701 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 SMPXQ9UHP9 88 aa12.46□□□□□ -0.41
PKP3-209ENST00000533069 IGHV7-4-1A0A0J9YVY3 117 aa12.45□□□□□ -0.42
PKP3-209ENST00000533069 RBMY1BA6NDE4 496 aaKnown RBP12.45□□□□□ -0.42
PKP3-209ENST00000533069 RBMY1EA6NEQ0 496 aaKnown RBP12.45□□□□□ -0.42
PKP3-209ENST00000533069 ZNF207O43670 478 aaKnown RBP12.45□□□□□ -0.42
PKP3-209ENST00000533069 RBMY1DP0C7P1 496 aaKnown RBP12.45□□□□□ -0.42
PKP3-209ENST00000533069 BMI1P35226 326 aa12.45□□□□□ -0.42
PKP3-209ENST00000533069 ZNF600Q6ZNG1 722 aa12.45□□□□□ -0.42
PKP3-209ENST00000533069 SLC51BQ86UW2 128 aa12.45□□□□□ -0.42
PKP3-209ENST00000533069 TMEM116Q8NCL8 245 aa12.45□□□□□ -0.42
PKP3-209ENST00000533069 MUC7Q8TAX7 377 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms