RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 GAGE12JA6NER3 117 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 J3KRW8 73 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 F2RL2O00254 374 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 GAGE7O76087 117 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 GAGE12FP0CL80 117 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 GAGE12GP0CL81 117 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 GAGE12IP0CL82 117 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 PAX9P55771 341 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 PSG4Q00888 419 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 GAGE4Q13068 117 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 GCSAMLQ5JQS6 135 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 MCRIP2Q9BUT9 160 aaKnown RBP5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 POLDIP2Q9Y2S7 368 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 NCBP2LA6PVI3 153 aaKnown RBP5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 CENPVQ7Z7K6 275 aaPredicted RBP5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 PDPNQ86YL7 162 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 RAB9BQ9NP90 201 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 DYNLRB1Q9NP97 96 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 OBP2BQ9NPH6 170 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 DECR2Q9NUI1 292 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 C10orf142B7Z368 130 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 NGFP01138 241 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 SRSF7Q16629 238 aaKnown RBP eCLIP5.63□□□□□ -1.512e-6■■■■□ 22.3
TGFBR3-209ENST00000532540 SLC35E4Q6ICL7 350 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 FOXB1Q99853 325 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 TRAV8-2A0A0B4J237 113 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 TMEM30CPA0ZSE6 113 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 ZNF716A6NP11 495 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 H0YJW9 148 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 RRHO14718 337 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 SMAD7O15105 426 aaKnown RBP5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 IGKV1D-33P01593 117 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 IGKV1-33P01594 117 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 ZNF32P17041 273 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 SUB1P53999 127 aaKnown RBP eCLIP5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 FNDC7Q5VTL7 733 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 EBLN2Q6P2I7 272 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 C9orf106Q8NAJ2 232 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 RAB1CQ92928 201 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 HARBI1Q96MB7 349 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 C1orf147Q96MC9 270 aaPredicted RBP5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 GGTLC1Q9BX51 225 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 WDR83OSQ9Y284 106 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 KALRNO60229 2985 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 NPIPB13A6NJU9 1138 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 OR11H12B2RN74 326 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 NPIPB4C9JG80 1138 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 FGF12P61328 243 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 ERVK11-1P61568 191 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 GNG3P63215 75 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 TMEM14EPQ6UXP3 125 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 OR11H1Q8NG94 326 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 OR1L4Q8NGR5 311 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 OR11H2Q8NH07 326 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 MRPL13Q9BYD1 178 aaKnown RBP5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 RABAC1Q9UI14 185 aa5.63□□□□□ -1.51
TGFBR3-209ENST00000532540 GRPP07492 148 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 CCL1P22362 96 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 PLAURQ03405 335 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 SLC25A47Q6Q0C1 308 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 ZNF441Q8N8Z8 693 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 RTL8AQ9BWD3 113 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 RNF115Q9Y4L5 304 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 TRBV7-9A0A0J9YWB2 115 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 SH2D7A6NKC9 451 aaPredicted RBP5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 CLDN14O95500 239 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 C8orf88P0DMB2 117 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 CACNG7P62955 275 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 EDDM3AQ14507 147 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 ATP5L2Q7Z4Y8 100 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 ZDHHC16Q969W1 377 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 RPEQ96AT9 228 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 SRSF8Q9BRL6 282 aaKnown RBP5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 LIME1Q9H400 295 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 MAP1LC3AQ9H492 121 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 DOPEY1Q5JWR5 2465 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 KIAA2026Q5HYC2 2103 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 WNT2P09544 360 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 ERHP84090 104 aaKnown RBP5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 ARPC1AQ92747 370 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 PAXXQ9BUH6 204 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 SPRY4Q9C004 299 aa5.62□□□□□ -1.51
TGFBR3-209ENST00000532540 BAHCC1Q9P281 2608 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 A0A0G2JRQ6 117 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 TIMM8AO60220 97 aaPredicted RBP5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 PTGDSP41222 190 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 KIR2DL2P43627 348 aaPredicted RBP5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 NABP2Q9BQ15 211 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 TMSB15BA0A087X1C1 80 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 A8MWV9 139 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 IGHV3-7P01780 117 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 REG1BP48304 166 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 C8orf86Q6ZUL3 223 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 DRAM1Q8N682 238 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 SLC25A33Q9BSK2 321 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 HIF1ANQ9NWT6 349 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 V9GYV3 84 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 CFAP46Q8IYW2 2715 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 hADV38S2A0JD32 116 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 ZNF562Q6V9R5 426 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms