RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 PSMG4Q5JS54 123 aa9.64□□□□□ -0.87
AMBRA1-210ENST00000531542 OR8G2PQ6IF36 304 aa9.64□□□□□ -0.87
AMBRA1-210ENST00000531542 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
AMBRA1-210ENST00000531542 TBC1D24Q9ULP9 559 aa9.64□□□□□ -0.87
AMBRA1-210ENST00000531542 TRAV10A0A0B4J240 114 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 DUXBA0A1W2PPF3 345 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 H3BMM0 161 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 IFNA10P01566 189 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 PSG1P11464 419 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 NKX2-1P43699 371 aaPredicted RBP9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 SUPT4H1P63272 117 aaKnown RBP9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 KLF9Q13886 244 aaPredicted RBP9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 C1orf194Q5T5A4 169 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 SIGLEC15Q6ZMC9 328 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 LGI3Q8N145 548 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 OR51G1Q8NGK1 321 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 DTD1Q8TEA8 209 aa9.63□□□□□ -0.87
AMBRA1-210ENST00000531542 VPS13DQ5THJ4 4388 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 ELOA3CA0A087WX78 387 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 IGLL5B9A064 214 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 ANXA3P12429 323 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 PRR20EP86478 221 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 PRR20CP86479 221 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 PRR20DP86480 221 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 PRR20BP86481 221 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 PRR20AP86496 221 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 LYZL2Q7Z4W2 148 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 CENPSQ8N2Z9 138 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 DEDD2Q8WXF8 326 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 RNF125Q96EQ8 232 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 ACY3Q96HD9 319 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 NEU1Q99519 415 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 RNF126Q9BV68 326 aa9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 SLIRPQ9GZT3 109 aaKnown RBP9.62□□□□□ -0.87
AMBRA1-210ENST00000531542 PITX3O75364 302 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 FABP1P07148 127 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 SLC25A6P12236 298 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 HLA-DRB4P13762 266 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 TNFSF8P32971 234 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 GAMTQ14353 236 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 Q6ZTC4 211 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 LRTM2Q8N967 370 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 RBKSQ9H477 322 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 HLA-DRB4X5D2U9 266 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 DNAH10Q8IVF4 4471 aa9.61□□□□□ -0.87
AMBRA1-210ENST00000531542 IGKV1D-37A0A075B6S9 117 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 FABP12A6NFH5 140 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 AKR1C4P17516 323 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 TMEM128Q5BJH2 165 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 SAMD13Q5VXD3 122 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 SPATA31B1PQ5VZV4 182 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 ZNF705AQ6ZN79 300 aaPredicted RBP9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 CLEC5AQ9NY25 188 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 PRR13Q9NZ81 148 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 AGRNO00468 2067 aa9.6□□□□□ -0.87
AMBRA1-210ENST00000531542 IGHV4-4A0A075B6R2 117 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 TMEM189A5PLL7 270 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 ZFP92A6NM28 416 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 ZNF705FA8MVS1 300 aaPredicted RBP9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 SNRPGP15A8MWD9 76 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 CFDP00746 253 aaPredicted RBP9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 AMBPP02760 352 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 ZNF705DP0CH99 300 aaPredicted RBP9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 ZNF705BP0CI00 300 aaPredicted RBP9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 FAUP35544 74 aaKnown RBP9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 PSMB3P49720 205 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 AP3S2P59780 193 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 SLC35E1Q96K37 410 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 TRGV9Q99603 122 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 MCUBQ9NWR8 336 aa9.59□□□□□ -0.87
AMBRA1-210ENST00000531542 DNAH6Q9C0G6 4158 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 HECTD4Q9Y4D8 3996 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 SOCS3O14543 225 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 ID1P41134 155 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 C12orf74Q32Q52 190 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 FOXI2Q6ZQN5 318 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 THAP8Q8NA92 274 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 OR1S1Q8NH92 325 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 SLC25A21Q9BQT8 299 aaPredicted RBP9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 SAV1Q9H4B6 383 aaPredicted RBP9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 XCL2Q9UBD3 114 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 SLC45A2Q9UMX9 530 aa9.58□□□□□ -0.88
AMBRA1-210ENST00000531542 DEFB131BA0A096LNP1 70 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 H3BMQ9 156 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 ISLRO14498 428 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 RAB11AP62491 216 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 ZNF90Q03938 601 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 MCFD2Q8NI22 146 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 TRIM63Q969Q1 353 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 CIB3Q96Q77 187 aaPredicted RBP9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 PBDC1Q9BVG4 233 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 CELA1Q9UNI1 258 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 TMED3Q9Y3Q3 217 aa9.57□□□□□ -0.88
AMBRA1-210ENST00000531542 TEX48A0A1B0GUV7 120 aa9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 NOL3O60936 208 aaKnown RBP9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 MED6O75586 246 aa9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 MEOX2P50222 304 aa9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 PAX9P55771 341 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms