RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 Q6ZRM9 215 aa9.43□□□□□ -0.9
TM9SF1-211ENST00000531406 OR52E5Q8NH55 327 aa9.43□□□□□ -0.9
TM9SF1-211ENST00000531406 CSTL1Q9H114 145 aa9.43□□□□□ -0.9
TM9SF1-211ENST00000531406 ENY2Q9NPA8 101 aa9.43□□□□□ -0.9
TM9SF1-211ENST00000531406 HSPB7Q9UBY9 170 aa9.43□□□□□ -0.9
TM9SF1-211ENST00000531406 LSM5Q9Y4Y9 91 aaKnown RBP9.43□□□□□ -0.9
TM9SF1-211ENST00000531406 IGKV3-7A0A075B6H7 116 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 CEBPZOSA8MTT3 80 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 K7EPK0 472 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 SSSCA1O60232 199 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 NXPH3O95157 252 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 MPC2O95563 127 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 MT-CO2P00403 227 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 IGHV3-48P01763 117 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 MBPP02686 304 aaPredicted RBP9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 C1QBP02746 253 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 HOXA1P49639 335 aaPredicted RBP9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 SPCS3P61009 180 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 IL15RAQ13261 267 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 FAM90A2PQ658T7 463 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 PRSS54Q6PEW0 395 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 GATAD1Q8WUU5 269 aa9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 PHLDA1Q8WV24 401 aaPredicted RBP9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 CIB3Q96Q77 187 aaPredicted RBP9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 RCL1Q9Y2P8 373 aaKnown RBP9.42□□□□□ -0.9
TM9SF1-211ENST00000531406 IGHV3OR16-13A0A075B7E8 117 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 FXYD6-FXYD2A0A087WZ82 144 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 TRAV14DV4A0A0A6YYC5 116 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 IGHV3-74A0A0B4J1X5 117 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 SYNGR2O43760 224 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 DEDDO75618 318 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 HNRNPCP07910 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 NUP62P37198 522 aaPredicted RBP9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 HSPE1P61604 102 aaKnown RBP9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 PRCDQ00LT1 54 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 ID3Q02535 119 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 GBGT1Q8N5D6 347 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 ZNF114Q8NC26 417 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 HYLS1Q96M11 299 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 RAB40CQ96S21 281 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 RBKSQ9H477 322 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 MBD2Q9UBB5 411 aa9.41□□□□□ -0.9
TM9SF1-211ENST00000531406 E5RGE8 158 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 SMLR1H3BR10 107 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 GNG7O60262 68 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 SLC25A4P12235 298 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 POLR2GP62487 172 aaKnown RBP eCLIP9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 RPP30P78346 268 aaKnown RBP9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 CD300CQ08708 224 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 TOMM20LQ6UXN7 152 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 TCF24Q7RTU0 167 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 DTD1Q8TEA8 209 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 PINX1Q96BK5 328 aaKnown RBP9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 RARRES2Q99969 163 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 MAGT1Q9H0U3 335 aa9.4□□□□□ -0.9
TM9SF1-211ENST00000531406 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 CD5P06127 495 aa9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 TAS2R30P59541 319 aa9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 PAFAH1B2P68402 229 aa9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 ERHP84090 104 aaKnown RBP9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 NOXA1Q86UR1 476 aa9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 LILRB2Q8N423 598 aa9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 INO80EQ8NBZ0 244 aaPredicted RBP9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 GINS3Q9BRX5 216 aa9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 VSIRQ9H7M9 311 aa9.39□□□□□ -0.91
TM9SF1-211ENST00000531406 G3V3Q6 166 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 IAPPP10997 89 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 P2RY1P47900 373 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 NPBWR1P48145 328 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 CAV2P51636 162 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 NANOS2P60321 138 aaKnown RBP9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 SPINK9Q5DT21 86 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 LGALS9CQ6DKI2 356 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 C11orf45Q8TAV5 145 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 ST8SIA2Q92186 375 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 MFFQ9GZY8 342 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 HEYLQ9NQ87 328 aaPredicted RBP9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 LYRM2Q9NU23 88 aaPredicted RBP9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 PSENENQ9NZ42 101 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 OR5AC2Q9NZP5 309 aa9.38□□□□□ -0.91
TM9SF1-211ENST00000531406 HMSDA8MTL9 139 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 BOLA2-SMG1P6H3BVE0 249 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 DNASE2O00115 360 aaPredicted RBP9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 ARPC5O15511 151 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 TSC22D2O75157 780 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 DFFBO76075 338 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 TMEM50AO95807 157 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 CA1P00915 261 aaPredicted RBP9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 SNCAP37840 140 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 EIF2B2P49770 351 aaKnown RBP9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 Q5BKY6 102 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 ZNF546Q86UE3 836 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 STX12Q86Y82 276 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 SMIM8Q96KF7 97 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 SLC25A31Q9H0C2 315 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 MS4A6AQ9H2W1 248 aa9.37□□□□□ -0.91
TM9SF1-211ENST00000531406 ZFAND3Q9H8U3 227 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms