RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 VBP1P61758 197 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 SCGB2B2Q4G0G5 96 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 C1orf134Q5TEV5 83 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 FAAP20Q6NZ36 180 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 SELENOHQ8IZQ5 122 aaKnown RBP9.4□□□□□ -0.9
HIF3A-214ENST00000531043 TERB2Q8NHR7 220 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 RNASEH2CQ8TDP1 164 aaKnown RBP9.4□□□□□ -0.9
HIF3A-214ENST00000531043 RTBDNQ9BSG5 229 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-214ENST00000531043 SAV1Q9H4B6 383 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-214ENST00000531043 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-214ENST00000531043 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
HIF3A-214ENST00000531043 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 SMIM9A6NGZ8 99 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 CEBPZOSA8MTT3 80 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 ARRDC1Q8N5I2 433 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 CCDC71LQ8N9Z2 235 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 OR4B1Q8NGF8 309 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 ZFAND1Q8TCF1 268 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 FAM210BQ96KR6 192 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 ABHD1Q96SE0 405 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 TMEM222Q9H0R3 208 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 MTFP1Q9UDX5 166 aa9.39□□□□□ -0.91
HIF3A-214ENST00000531043 YTHDF2Q9Y5A9 579 aaKnown RBP9.39□□□□□ -0.91
HIF3A-214ENST00000531043 IGKV1D-37A0A075B6S9 117 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 TEX13DA0A0J9YY54 714 aaPredicted RBP9.38□□□□□ -0.91
HIF3A-214ENST00000531043 FAM25AB3EWG3 89 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 FAM25CB3EWG5 89 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 FAM25GB3EWG6 89 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 ZNF90Q03938 601 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 ZNF79Q15937 498 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 RNF212Q495C1 297 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 NMSQ5H8A3 153 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 FOXI2Q6ZQN5 318 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 RBPMSQ93062 196 aaKnown RBP9.38□□□□□ -0.91
HIF3A-214ENST00000531043 RNF125Q96EQ8 232 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 C20orf173Q96LM9 149 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 PBDC1Q9BVG4 233 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 FUNDC2Q9BWH2 189 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 NAA60Q9H7X0 242 aa9.38□□□□□ -0.91
HIF3A-214ENST00000531043 DNAH5Q8TE73 4624 aa9.37□□□□□ -0.91
HIF3A-214ENST00000531043 LOC102723971A0A1B0GUV8 181 aa9.37□□□□□ -0.91
HIF3A-214ENST00000531043 C16orf90A8MZG2 172 aa9.37□□□□□ -0.91
HIF3A-214ENST00000531043 GSTZ1O43708 216 aaPredicted RBP9.37□□□□□ -0.91
HIF3A-214ENST00000531043 RAB3DO95716 219 aa9.37□□□□□ -0.91
HIF3A-214ENST00000531043 RORCP51449 518 aa9.37□□□□□ -0.91
HIF3A-214ENST00000531043 TMEM268Q5VZI3 342 aa9.37□□□□□ -0.91
HIF3A-214ENST00000531043 FAM219AQ8IW50 185 aa9.37□□□□□ -0.91
HIF3A-214ENST00000531043 TMEM229BQ8NBD8 167 aa9.37□□□□□ -0.91
HIF3A-214ENST00000531043 EXTL2Q9UBQ6 330 aa9.37□□□□□ -0.91
HIF3A-214ENST00000531043 PSG9Q00887 426 aa9.36□□□□□ -0.91
HIF3A-214ENST00000531043 OXA1LQ15070 435 aa9.36□□□□□ -0.91
HIF3A-214ENST00000531043 SOHLH1Q5JUK2 328 aa9.36□□□□□ -0.91
HIF3A-214ENST00000531043 FAM78BQ5VT40 261 aa9.36□□□□□ -0.91
HIF3A-214ENST00000531043 ETFRF1Q6IPR1 90 aa9.36□□□□□ -0.91
HIF3A-214ENST00000531043 STEAP1BQ6NZ63 245 aa9.36□□□□□ -0.91
HIF3A-214ENST00000531043 C17orf77Q96MU5 243 aa9.36□□□□□ -0.91
HIF3A-214ENST00000531043 CLUHP3Q96NS8 147 aa9.36□□□□□ -0.91
HIF3A-214ENST00000531043 NAA50Q9GZZ1 169 aaKnown RBP9.36□□□□□ -0.91
HIF3A-214ENST00000531043 HBE1P02100 147 aa9.35□□□□□ -0.91
HIF3A-214ENST00000531043 TBPP20226 339 aa9.35□□□□□ -0.91
HIF3A-214ENST00000531043 PSMB3P49720 205 aa9.35□□□□□ -0.91
HIF3A-214ENST00000531043 LYZP61626 148 aa9.35□□□□□ -0.91
HIF3A-214ENST00000531043 DAD1P61803 113 aa9.35□□□□□ -0.91
HIF3A-214ENST00000531043 OR2F1Q13607 317 aa9.35□□□□□ -0.91
HIF3A-214ENST00000531043 KLF9Q13886 244 aaPredicted RBP9.35□□□□□ -0.91
HIF3A-214ENST00000531043 COQ8AQ8NI60 647 aa9.35□□□□□ -0.91
HIF3A-214ENST00000531043 C7orf50Q9BRJ6 194 aaKnown RBP9.35□□□□□ -0.91
HIF3A-214ENST00000531043 GOLT1BQ9Y3E0 138 aa9.35□□□□□ -0.91
HIF3A-214ENST00000531043 A0A087WXM4 84 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 A0A0J9YX75 114 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 CRYM-AS1A6NIL9 109 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 ZNF705GA8MUZ8 300 aaPredicted RBP9.34□□□□□ -0.91
HIF3A-214ENST00000531043 B3GALNT1O75752 331 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 TNFAIP8O95379 198 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 ID1P41134 155 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 PAX9P55771 341 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 TAS2R19P59542 299 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 GAMTQ14353 236 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 FCN2Q15485 313 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 RRN3P1Q2M238 152 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 OR8G2PQ6IF36 304 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 AMTNQ6UX39 209 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 MAPKAPK5-AS1Q8N8E1 139 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 MIXL1Q9H2W2 232 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 RBKSQ9H477 322 aa9.34□□□□□ -0.91
HIF3A-214ENST00000531043 C14orf166Q9Y224 244 aaKnown RBP9.34□□□□□ -0.91
HIF3A-214ENST00000531043 TEX48A0A1B0GUV7 120 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 ZFP92A6NM28 416 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 A8MTW9 85 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 CDK2AP2O75956 126 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 SULT1A3P0DMM9 295 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 SULT1A4P0DMN0 295 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 SUPT4H1P63272 117 aaKnown RBP9.33□□□□□ -0.92
HIF3A-214ENST00000531043 GPR107Q5VW38 600 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 LGI3Q8N145 548 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 ZNRF2Q8NHG8 242 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 GPR132Q9UNW8 380 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 TMEM56-RWDD3S4R434 201 aa9.33□□□□□ -0.92
HIF3A-214ENST00000531043 HERC1Q15751 4861 aa9.32□□□□□ -0.92
HIF3A-214ENST00000531043 IGKV1OR2-108A0A075B7D4 117 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms