RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 C5orf64Q2M2E5 130 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 KLK9Q2XQG4 91 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 ACTL10Q5JWF8 245 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 C10orf55Q5SWW7 151 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 SPATA31B1PQ5VZV4 182 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 ZNF562Q6V9R5 426 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 FAM231DQ6ZW35 169 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 LYPD1Q8N2G4 141 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 ARL6IP6Q8N6S5 226 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 OR5AU1Q8NGC0 362 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 OR2T6Q8NHC8 308 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 TMEM37Q8WXS4 190 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 TMEM68Q96MH6 324 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 ATP6V0BQ99437 205 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 C12orf57Q99622 126 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 PAXXQ9BUH6 204 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 SLC25A2Q9BXI2 301 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 OR51M1Q9H341 326 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 ZNF355PQ9NSJ1 428 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 GAR1Q9NY12 217 aaKnown RBP4.42□□□□□ -1.7
PCF11-205ENST00000530906 IL36BQ9NZH7 164 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 THYN1Q9P016 225 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 KLK9Q9UKQ9 250 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 DSPP15924 2871 aaKnown RBP4.41□□□□□ -1.7
PCF11-205ENST00000530906 IGHV3-72A0A0B4J1Y9 119 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 TRBV6-1A0A0K0K1D8 114 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 A0A1W2PPQ1 181 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 GGTLC3B5MD39 225 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 I3L2K1 104 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 PHOX2AO14813 284 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 GCGP01275 180 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 TRGC1P0CF51 173 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 IGLC1P0CG04 106 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 FAM106CPP0CH98 169 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 PDLIM4P50479 330 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 YPEL3P61236 119 aaPredicted RBP4.41□□□□□ -1.7
PCF11-205ENST00000530906 ARF6P62330 175 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 LY6DQ14210 128 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 CENPWQ5EE01 88 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 HCP5Q6MZN7 132 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 WDR73Q6P4I2 378 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 RASL11AQ6T310 242 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 LINC00305Q7Z4B0 112 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 VMO1Q7Z5L0 202 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 TMEM183AQ8IXX5 376 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 Q8N6K4 173 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 C5orf17Q8NAS9 161 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 SGMS2Q8NHU3 365 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 OCC1Q8TAD7 63 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 ZNF503Q96F45 646 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 TXN2Q99757 166 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 RASL11BQ9BPW5 248 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 DERL1Q9BUN8 251 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 SIRPDQ9H106 197 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 MEGF9Q9H1U4 602 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 FBXL15Q9H469 300 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 UBTD1Q9HAC8 227 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 HIGD1AQ9Y241 93 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 KLF12Q9Y4X4 402 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 CELSR3Q9NYQ7 3312 aa4.41□□□□□ -1.7
PCF11-205ENST00000530906 SERTM2A0A1B0GWG4 89 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 FBLL1A6NHQ2 334 aaKnown RBP4.4□□□□□ -1.71
PCF11-205ENST00000530906 PEX7O00628 323 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 TOMM40O96008 361 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 HLA-DRB1P01911 266 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 NBEAP1P0C6P0 100 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 HIST1H1EP10412 219 aaKnown RBP4.4□□□□□ -1.71
PCF11-205ENST00000530906 CRYBB3P26998 211 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 MYCNOSP40205 109 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 RAB9AP51151 201 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 MFAP2P55001 183 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 NDUFA6P56556 154 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 DSCR9P59020 149 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 ERVFC1-1P60608 527 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 SUMO1P63165 101 aaKnown RBP4.4□□□□□ -1.71
PCF11-205ENST00000530906 SSBP2P81877 361 aaPredicted RBP4.4□□□□□ -1.71
PCF11-205ENST00000530906 PDE6HQ13956 83 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 FXYD3Q14802 87 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 TMEM183BQ1AE95 376 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 RPEL1Q2QD12 228 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 CT83Q5H943 113 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 PATE2Q6UY27 113 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 HIST3H2BBQ8N257 126 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 TTC9CQ8N5M4 171 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 ARPC1AQ92747 370 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 FRZBQ92765 325 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 FXYD5Q96DB9 178 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 FAM122AQ96E09 287 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 FMC1Q96HJ9 113 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 RITA1Q96K30 269 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 IGF2BP2-AS1Q96M15 143 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 ATG101Q9BSB4 218 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 OTORQ9NRC9 128 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 SOX21Q9Y651 276 aaPredicted RBP4.4□□□□□ -1.71
PCF11-205ENST00000530906 ABCA4P78363 2273 aa4.4□□□□□ -1.71
PCF11-205ENST00000530906 TPRP12270 2363 aaKnown RBP4.4□□□□□ -1.71
PCF11-205ENST00000530906 ZFHX4Q86UP3 3567 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 HIVEP3Q5T1R4 2406 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 IGLV11-55A0A075B6I3 123 aa4.39□□□□□ -1.71
PCF11-205ENST00000530906 A0A0U1RQK1 487 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms