RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 PPP1R27Q86WC6 154 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 LHFPL1Q86WI0 220 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 STPG4Q8N801 248 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 ARPC1AQ92747 370 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 SLC25A2Q9BXI2 301 aa6.33□□□□□ -1.4
CTNND1-223ENST00000529986 A0A1B0GW64 132 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 SMKR1H3BMG3 65 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 ITGB1BP1O14713 200 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 CD28P10747 220 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 MORN2Q502X0 79 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 CLEC2AQ6UVW9 174 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 ZNF497Q6ZNH5 498 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-223ENST00000529986 RNF125Q96EQ8 232 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 RLFQ13129 1914 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 C10orf55Q5SWW7 151 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 RSPO3Q9BXY4 272 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-223ENST00000529986 C2orf82Q6UX34 121 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 ZNF562Q6V9R5 426 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 LINC01560Q8TB33 94 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 ZNF625Q96I27 306 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-223ENST00000529986 LINC01587Q99440 93 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 FBLN5Q9UBX5 448 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 CASP8AP2Q9UKL3 1982 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 MST1LQ2TV78 715 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 LYZL1Q6UWQ5 148 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 Q6ZT83 130 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 CENPVQ7Z7K6 275 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-223ENST00000529986 FGFBP3Q8TAT2 258 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 MGST2Q99735 147 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 ZNF581Q9P0T4 197 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 AHCTF1Q8WYP5 2266 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 CEP250Q9BV73 2442 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 TRAV1-1A0A0B4J248 108 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 GGTLC3B5MD39 225 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 SRD5A1P18405 259 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 TMEM30BQ3MIR4 351 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 FAM90A2PQ658T7 463 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 ZCCHC24Q8N2G6 241 aaKnown RBP6.32□□□□□ -1.4
CTNND1-223ENST00000529986 DLX4Q92988 240 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-223ENST00000529986 DPM3Q9P2X0 92 aa6.32□□□□□ -1.4
CTNND1-223ENST00000529986 RALGAPA1Q6GYQ0 2036 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 EPOPA6NHQ4 379 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 CD5LO43866 347 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 MYOD1P15172 320 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 CCL1P22362 96 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 DUTP33316 252 aaKnown RBP6.31□□□□□ -1.4
CTNND1-223ENST00000529986 LAGE3Q14657 143 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 ORMDL2Q53FV1 153 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 TSSC4Q9Y5U2 329 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-223ENST00000529986 TRAV3A0A0B4J244 114 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 SP9P0CG40 484 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 GATD1Q8NB37 220 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 RNF115Q9Y4L5 304 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 PMS2P5A8MQ11 134 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 PPBPP02775 128 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 LINC00205P59089 165 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 ASCL4Q6XD76 172 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 MESP1Q9BRJ9 268 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 TRAV8-3A0A0A6YYJ7 113 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 C5orf63A6NC05 138 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 IGKV1-5P01602 117 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 ZC2HC1BQ5TFG8 222 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 MYOFQ9NZM1 2061 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 KIF26BQ2KJY2 2108 aa6.31□□□□□ -1.4
CTNND1-223ENST00000529986 IGHV2OR16-5A0A0B4J2B6 119 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 EFEMP2O95967 443 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 GLRXP35754 106 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 KLF17Q5JT82 389 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-223ENST00000529986 CFAP161Q6P656 301 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 IGKV1-27A0A075B6S5 117 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 C9JAW5 83 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 TM4SF5O14894 197 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 IGHV1-2P23083 117 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 PPP1R32Q7Z5V6 425 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 IMMP1LQ96LU5 166 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 LINC00479Q96M42 142 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 CHAC1Q9BUX1 264 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 YAE1D1Q9NRH1 226 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 PLSCR4Q9NRQ2 329 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 LINC00271P0C7V0 271 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 PRCDQ00LT1 54 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 TMEM42Q69YG0 159 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 PRSS57Q6UWY2 283 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 TNFRSF14Q92956 283 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 YPEL1O60688 119 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 LILRA1O75019 489 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 HTN3P15516 51 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 CSRP2Q16527 193 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 NMSQ5H8A3 153 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 ZNF474Q6S9Z5 364 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-223ENST00000529986 YPEL2Q96QA6 119 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 TRGV2A0A075B6R0 118 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 IGHV3-73A0A0B4J1V6 119 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 LINC00158P58513 81 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 RPL15P61313 204 aaKnown RBP6.3□□□□□ -1.4
CTNND1-223ENST00000529986 IGFL4Q6B9Z1 124 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 CRIPAKQ8N1N5 446 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 SAP25Q8TEE9 199 aa6.3□□□□□ -1.4
CTNND1-223ENST00000529986 SPTA1P02549 2419 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms