RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 TRIM16LQ309B1 348 aa11.48□□□□□ -0.57
COL16A1-216ENST00000529928 C1orf134Q5TEV5 83 aa11.48□□□□□ -0.57
COL16A1-216ENST00000529928 SELENOHQ8IZQ5 122 aaKnown RBP11.48□□□□□ -0.57
COL16A1-216ENST00000529928 PDCD10Q9BUL8 212 aa11.48□□□□□ -0.57
COL16A1-216ENST00000529928 FNDC4Q9H6D8 234 aaPredicted RBP11.48□□□□□ -0.57
COL16A1-216ENST00000529928 MRPL36Q9P0J6 103 aaKnown RBP11.48□□□□□ -0.57
COL16A1-216ENST00000529928 TMEM56-RWDD3S4R434 201 aa11.48□□□□□ -0.57
COL16A1-216ENST00000529928 U3KQE9 123 aa11.48□□□□□ -0.57
COL16A1-216ENST00000529928 TEX48A0A1B0GUV7 120 aa11.47□□□□□ -0.57
COL16A1-216ENST00000529928 ATG12O94817 140 aa11.47□□□□□ -0.57
COL16A1-216ENST00000529928 IGKV1-17P01599 117 aa11.47□□□□□ -0.57
COL16A1-216ENST00000529928 HOXA1P49639 335 aaPredicted RBP11.47□□□□□ -0.57
COL16A1-216ENST00000529928 SUPT4H1P63272 117 aaKnown RBP11.47□□□□□ -0.57
COL16A1-216ENST00000529928 C16orf54Q6UWD8 224 aa11.47□□□□□ -0.57
COL16A1-216ENST00000529928 ZNF705AQ6ZN79 300 aaPredicted RBP11.47□□□□□ -0.57
COL16A1-216ENST00000529928 GLMPQ8WWB7 406 aa11.47□□□□□ -0.57
COL16A1-216ENST00000529928 SEPSECSQ9HD40 501 aaKnown RBP11.47□□□□□ -0.57
COL16A1-216ENST00000529928 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 ZNF705FA8MVS1 300 aaPredicted RBP11.46□□□□□ -0.57
COL16A1-216ENST00000529928 FAM90A26D6RGX4 464 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 H3BMM0 161 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL16A1-216ENST00000529928 ZNF705DP0CH99 300 aaPredicted RBP11.46□□□□□ -0.57
COL16A1-216ENST00000529928 ZNF705BP0CI00 300 aaPredicted RBP11.46□□□□□ -0.57
COL16A1-216ENST00000529928 ETV6P41212 452 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 EMP1P54849 157 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 DHODHQ02127 395 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 BSXQ3C1V8 233 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 TIGITQ495A1 244 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 FAM219AQ8IW50 185 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 RBPMSQ93062 196 aaKnown RBP11.46□□□□□ -0.57
COL16A1-216ENST00000529928 ENY2Q9NPA8 101 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 SCP2D1Q9UJQ7 156 aa11.46□□□□□ -0.57
COL16A1-216ENST00000529928 ABCA13Q86UQ4 5058 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 DNAH17Q9UFH2 4485 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 PKD1P98161 4303 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 DNAH11Q96DT5 4516 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 CDK2AP2O75956 126 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 MLANAQ16655 118 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 PYDC2Q56P42 97 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 Q8WTZ3 238 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 RRNAD1Q96FB5 475 aaKnown RBP11.45□□□□□ -0.58
COL16A1-216ENST00000529928 NRN1Q9NPD7 142 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 MCUBQ9NWR8 336 aa11.45□□□□□ -0.58
COL16A1-216ENST00000529928 RPS10-NUDT3A0A1W2PQS6 291 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 S100A5P33763 92 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 TMEM268Q5VZI3 342 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 OR1S2Q8NGQ3 325 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 OR52E5Q8NH55 327 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 GPR146Q96CH1 333 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 NIPSNAP3BQ9BS92 247 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 PRR13Q9NZ81 148 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 DKK2Q9UBU2 259 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 RFNGQ9Y644 331 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
COL16A1-216ENST00000529928 IGHV3OR16-12A0A075B7B8 117 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 C16orf90A8MZG2 172 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 IGLC1P0CG04 106 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 NKX2-1P43699 371 aaPredicted RBP11.43□□□□□ -0.58
COL16A1-216ENST00000529928 YPEL3P61236 119 aaPredicted RBP11.43□□□□□ -0.58
COL16A1-216ENST00000529928 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 TOMM5Q8N4H5 51 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 IL22RA2Q969J5 263 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 SCGB3A2Q96PL1 93 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 SRRQ9GZT4 340 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.43□□□□□ -0.58
COL16A1-216ENST00000529928 CACNG5Q9UF02 275 aa11.43□□□□□ -0.58
COL16A1-216ENST00000529928 DYNC1H1Q14204 4646 aaKnown RBP11.43□□□□□ -0.58
COL16A1-216ENST00000529928 FAM3BP58499 235 aaPredicted RBP11.42□□□□□ -0.58
COL16A1-216ENST00000529928 SPCS3P61009 180 aa11.42□□□□□ -0.58
COL16A1-216ENST00000529928 OXA1LQ15070 435 aa11.42□□□□□ -0.58
COL16A1-216ENST00000529928 NMSQ5H8A3 153 aa11.42□□□□□ -0.58
COL16A1-216ENST00000529928 FAM222AQ5U5X8 452 aa11.42□□□□□ -0.58
COL16A1-216ENST00000529928 TMEM170AQ8WVE7 144 aa11.42□□□□□ -0.58
COL16A1-216ENST00000529928 DEDD2Q8WXF8 326 aa11.42□□□□□ -0.58
COL16A1-216ENST00000529928 BUB3O43684 328 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 IL4P05112 153 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 SLC25A4P12235 298 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 HTN3P15516 51 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 AKR1C4P17516 323 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 OR10J1P30954 320 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 HTR2BP41595 481 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 RND2P52198 227 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 AP3S2P59780 193 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 USF2Q15853 346 aaPredicted RBP11.41□□□□□ -0.58
COL16A1-216ENST00000529928 LYZL2Q7Z4W2 148 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 RNASE11Q8TAA1 199 aaKnown RBP11.41□□□□□ -0.58
COL16A1-216ENST00000529928 SDHCQ99643 169 aaPredicted RBP11.41□□□□□ -0.58
COL16A1-216ENST00000529928 KCNIP3Q9Y2W7 256 aa11.41□□□□□ -0.58
COL16A1-216ENST00000529928 FAUP35544 74 aaKnown RBP11.4□□□□□ -0.58
COL16A1-216ENST00000529928 BAK1Q16611 211 aa11.4□□□□□ -0.58
COL16A1-216ENST00000529928 PRSS54Q6PEW0 395 aa11.4□□□□□ -0.58
COL16A1-216ENST00000529928 TMED3Q9Y3Q3 217 aa11.4□□□□□ -0.58
COL16A1-216ENST00000529928 NACAE9PAV3 2078 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 A0A0B4J2A0 478 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 IGKV3-20P01619 116 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 FXYD7P58549 80 aa11.39□□□□□ -0.59
COL16A1-216ENST00000529928 TNP2Q05952 138 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms