RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	SHISA9	B4DS77	424 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	NBEAP1	P0C6P0	100 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	RUSC1-AS1	Q66K80	236 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	HCP5	Q6MZN7	132 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475	NGB	Q9NPG2	151 aa		18.73	■□□□□ 0.59
GSDMD-208	ENST00000528475		A0A1B0GXF2	115 aa		18.72	■□□□□ 0.59
GSDMD-208	ENST00000528475	HYPM	O75409	117 aa		18.72	■□□□□ 0.59
GSDMD-208	ENST00000528475	RPLP1	P05386	114 aa	Known RBP	18.72	■□□□□ 0.59
GSDMD-208	ENST00000528475	C3orf79	P0CE67	100 aa		18.72	■□□□□ 0.59
GSDMD-208	ENST00000528475		E7EQL1	145 aa		18.72	■□□□□ 0.59
GSDMD-208	ENST00000528475	GP9	P14770	177 aa		18.72	■□□□□ 0.59
GSDMD-208	ENST00000528475	C5orf17	Q8NAS9	161 aa		18.72	■□□□□ 0.59
GSDMD-208	ENST00000528475	HIGD1C	A8MV81	97 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	TOMM40	O96008	361 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	IGLV1-47	P01700	117 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	CASP6	P55212	293 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	TNXA	Q16473	311 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	CT83	Q5H943	113 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	ASPHD1	Q5U4P2	390 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	PRR27	Q6MZM9	219 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	GFRAL	Q6UXV0	394 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	FMC1	Q96HJ9	113 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	SIGLEC9	Q9Y336	463 aa		18.71	■□□□□ 0.59
GSDMD-208	ENST00000528475	IGHV3-72	A0A0B4J1Y9	119 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	IGHV1-69-2	A0A0G2JMI3	117 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	ZNF124	Q15973	351 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	C8orf46	Q8TAG6	207 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	BLNK	Q8WV28	456 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	ABHD17A	Q96GS6	310 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	PRSS22	Q9GZN4	317 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	ZNF492	Q9P255	531 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475		Q8NA96	180 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	BORCS7	Q96B45	105 aa		18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	ALKBH7	Q9BT30	221 aa	Predicted RBP	18.7	■□□□□ 0.58
GSDMD-208	ENST00000528475	IGHV2-26	A0A0B4J1V2	119 aa		18.69	■□□□□ 0.58
GSDMD-208	ENST00000528475	SPATA45	Q537H7	98 aa		18.69	■□□□□ 0.58
GSDMD-208	ENST00000528475	RBM14	Q96PK6	669 aa	Known RBP	18.69	■□□□□ 0.58
GSDMD-208	ENST00000528475	F11R	Q9Y624	299 aa	Known RBP	18.69	■□□□□ 0.58
GSDMD-208	ENST00000528475	LTA	P01374	205 aa		18.69	■□□□□ 0.58
GSDMD-208	ENST00000528475	FAM19A2	Q8N3H0	131 aa		18.69	■□□□□ 0.58
GSDMD-208	ENST00000528475	RPP21	Q9H633	154 aa	Known RBP	18.69	■□□□□ 0.58
GSDMD-208	ENST00000528475	SOX21	Q9Y651	276 aa	Predicted RBP	18.69	■□□□□ 0.58
GSDMD-208	ENST00000528475	NAV3	Q8IVL0	2385 aa		18.68	■□□□□ 0.58
GSDMD-208	ENST00000528475	GVINP1	Q7Z2Y8	2422 aa		18.68	■□□□□ 0.58
GSDMD-208	ENST00000528475	RALY	Q9UKM9	306 aa	Known RBP	18.68	■□□□□ 0.58
GSDMD-208	ENST00000528475	C19orf71	A6NCJ1	209 aa		18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475	VWC2L	B2RUY7	222 aa		18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475	CNTFR	P26992	372 aa		18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475	IGHV1-3	A0A0C4DH29	117 aa		18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475	TEX22	C9J3V5	150 aa		18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475	APOBEC3A	P31941	199 aa	Predicted RBP	18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475	MMD	Q15546	238 aa		18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475	UQCR10	Q9UDW1	63 aa		18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475	SH3BGRL2	Q9UJC5	107 aa		18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475	INSIG2	Q9Y5U4	225 aa		18.67	■□□□□ 0.58
GSDMD-208	ENST00000528475		A8MWL6	223 aa		18.66	■□□□□ 0.58
GSDMD-208	ENST00000528475		B9A039	149 aa		18.66	■□□□□ 0.58
GSDMD-208	ENST00000528475	TCRA	P04437	139 aa		18.66	■□□□□ 0.58
GSDMD-208	ENST00000528475	NTF3	P20783	257 aa		18.66	■□□□□ 0.58
GSDMD-208	ENST00000528475	PPP1R27	Q86WC6	154 aa		18.66	■□□□□ 0.58
GSDMD-208	ENST00000528475		Q9H3A6	140 aa		18.66	■□□□□ 0.58
GSDMD-208	ENST00000528475	BUB1B-PAK6	H3BSN5	160 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	HSBP1	O75506	76 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	FAM87A	P0C7U9	286 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	PMCHL1	Q16048	86 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	TMEM190	Q8WZ59	177 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	CLEC7A	Q9BXN2	247 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	GFRA4	Q9GZZ7	299 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	TMEM14C	Q9P0S9	112 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	RBP4	P02753	201 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	IGLC2	P0DOY2	106 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	IGLC3	P0DOY3	106 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	HBB	P68871	147 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	FOXC1	Q12948	553 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	FAM162B	Q5T6X4	162 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	HIGD1A	Q9Y241	93 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	CFAP47	Q6ZTR5	3102 aa		18.65	■□□□□ 0.58
GSDMD-208	ENST00000528475	ZNF25	P17030	456 aa	Predicted RBP	18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	LINC00322	Q6ZN03	302 aa	Predicted RBP	18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	RNF5	Q99942	180 aa		18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	ARFGEF3	Q5TH69	2177 aa		18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	IGLC1	P0CG04	106 aa		18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	G0S2	P27469	103 aa		18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	CAMP	P49913	170 aa		18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	KLHDC1	Q8N7A1	406 aa		18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	SRSF8	Q9BRL6	282 aa	Known RBP	18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	OTOR	Q9NRC9	128 aa		18.64	■□□□□ 0.57
GSDMD-208	ENST00000528475	CEP250	Q9BV73	2442 aa		18.63	■□□□□ 0.57
GSDMD-208	ENST00000528475	FAM231B	A6NCW3	169 aa		18.63	■□□□□ 0.57
GSDMD-208	ENST00000528475	GAGE1	Q13065	139 aa		18.63	■□□□□ 0.57
GSDMD-208	ENST00000528475	SGK494	Q96LW2	274 aa		18.63	■□□□□ 0.57
GSDMD-208	ENST00000528475	SSBP4	Q9BWG4	385 aa	Predicted RBP	18.63	■□□□□ 0.57
GSDMD-208	ENST00000528475	RPH3AL	Q9UNE2	315 aa		18.63	■□□□□ 0.57
GSDMD-208	ENST00000528475	FAM181B	A6NEQ2	426 aa		18.62	■□□□□ 0.57
GSDMD-208	ENST00000528475		P01737	135 aa		18.62	■□□□□ 0.57
GSDMD-208	ENST00000528475	TCF24	Q7RTU0	167 aa		18.62	■□□□□ 0.57
GSDMD-208	ENST00000528475	LHFPL4	Q7Z7J7	247 aa		18.62	■□□□□ 0.57
GSDMD-208	ENST00000528475	OR8B3	Q8NGG8	313 aa		18.62	■□□□□ 0.57
GSDMD-208	ENST00000528475	OR8B2	Q96RD0	313 aa		18.62	■□□□□ 0.57
GSDMD-208	ENST00000528475	NPIPB6	E9PJ23	425 aa		18.62	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms