RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 MCUBQ9NWR8 336 aa16.19■□□□□ 0.18
TRAPPC4-208ENST00000527680 BUB3O43684 328 aa16.18■□□□□ 0.18
TRAPPC4-208ENST00000527680 KLF9Q13886 244 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-208ENST00000527680 NMSQ5H8A3 153 aa16.18■□□□□ 0.18
TRAPPC4-208ENST00000527680 LGI3Q8N145 548 aa16.18■□□□□ 0.18
TRAPPC4-208ENST00000527680 PBDC1Q9BVG4 233 aa16.18■□□□□ 0.18
TRAPPC4-208ENST00000527680 PFDN2Q9UHV9 154 aa16.18■□□□□ 0.18
TRAPPC4-208ENST00000527680 IGHV4-4A0A075B6R2 117 aa16.17■□□□□ 0.18
TRAPPC4-208ENST00000527680 CCR6P51684 374 aa16.17■□□□□ 0.18
TRAPPC4-208ENST00000527680 SMCO1Q147U7 214 aa16.17■□□□□ 0.18
TRAPPC4-208ENST00000527680 ZNF767PQ75MW2 155 aa16.17■□□□□ 0.18
TRAPPC4-208ENST00000527680 DTD1Q8TEA8 209 aa16.17■□□□□ 0.18
TRAPPC4-208ENST00000527680 RBKSQ9H477 322 aa16.17■□□□□ 0.18
TRAPPC4-208ENST00000527680 SEPSECSQ9HD40 501 aaKnown RBP16.17■□□□□ 0.18
TRAPPC4-208ENST00000527680 ANKRD20A5PA0PJZ0 165 aa16.16■□□□□ 0.18
TRAPPC4-208ENST00000527680 ZFP92A6NM28 416 aa16.16■□□□□ 0.18
TRAPPC4-208ENST00000527680 H3BMM0 161 aa16.16■□□□□ 0.18
TRAPPC4-208ENST00000527680 LYZL2Q7Z4W2 148 aa16.16■□□□□ 0.18
TRAPPC4-208ENST00000527680 A0A0B4J2A0 478 aa16.15■□□□□ 0.18
TRAPPC4-208ENST00000527680 ANXA3P12429 323 aa16.15■□□□□ 0.18
TRAPPC4-208ENST00000527680 ALDH3B2P48448 385 aa16.15■□□□□ 0.18
TRAPPC4-208ENST00000527680 OR1S1Q8NH92 325 aa16.15■□□□□ 0.18
TRAPPC4-208ENST00000527680 RNF125Q96EQ8 232 aa16.15■□□□□ 0.18
TRAPPC4-208ENST00000527680 LINC00052Q96N35 136 aa16.15■□□□□ 0.18
TRAPPC4-208ENST00000527680 HSPB7Q9UBY9 170 aa16.15■□□□□ 0.18
TRAPPC4-208ENST00000527680 RSL24D1Q9UHA3 163 aaKnown RBP16.15■□□□□ 0.18
TRAPPC4-208ENST00000527680 SHPKQ9UHJ6 478 aa16.15■□□□□ 0.18
TRAPPC4-208ENST00000527680 DEFB131BA0A096LNP1 70 aa16.14■□□□□ 0.17
TRAPPC4-208ENST00000527680 NUP62P37198 522 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC4-208ENST00000527680 CELA1Q9UNI1 258 aa16.14■□□□□ 0.17
TRAPPC4-208ENST00000527680 IGKV3-20P01619 116 aa16.13■□□□□ 0.17
TRAPPC4-208ENST00000527680 ID1P41134 155 aa16.13■□□□□ 0.17
TRAPPC4-208ENST00000527680 C12orf74Q32Q52 190 aa16.13■□□□□ 0.17
TRAPPC4-208ENST00000527680 RAB2BQ8WUD1 216 aa16.13■□□□□ 0.17
TRAPPC4-208ENST00000527680 SLC35E1Q96K37 410 aa16.13■□□□□ 0.17
TRAPPC4-208ENST00000527680 RNF126Q9BV68 326 aa16.13■□□□□ 0.17
TRAPPC4-208ENST00000527680 HLA-DRB4P13762 266 aa16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 GPX4P36969 197 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 NKX2-1P43699 371 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 ATP5IP56385 69 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 SRPXP78539 464 aa16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 ZNF90Q03938 601 aa16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 GAMTQ14353 236 aa16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 DYNC2LI1Q8TCX1 351 aa16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 PPP1R14BQ96C90 147 aa16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 CCDC59Q9P031 241 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 PAIP2BQ9ULR5 123 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 HLA-DRB4X5D2U9 266 aa16.12■□□□□ 0.17
TRAPPC4-208ENST00000527680 IGHV3OR16-12A0A075B7B8 117 aa16.11■□□□□ 0.17
TRAPPC4-208ENST00000527680 FABP12A6NFH5 140 aa16.11■□□□□ 0.17
TRAPPC4-208ENST00000527680 SNRPGP15A8MWD9 76 aa16.11■□□□□ 0.17
TRAPPC4-208ENST00000527680 FABP1P07148 127 aa16.11■□□□□ 0.17
TRAPPC4-208ENST00000527680 EMP1P54849 157 aa16.11■□□□□ 0.17
TRAPPC4-208ENST00000527680 FXYD7P58549 80 aa16.11■□□□□ 0.17
TRAPPC4-208ENST00000527680 LYZP61626 148 aa16.11■□□□□ 0.17
TRAPPC4-208ENST00000527680 DNAH10Q8IVF4 4471 aa16.11■□□□□ 0.17
TRAPPC4-208ENST00000527680 SUPT4H1P63272 117 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-208ENST00000527680 OR2F1Q13607 317 aa16.1■□□□□ 0.17
TRAPPC4-208ENST00000527680 OR8G2PQ6IF36 304 aa16.1■□□□□ 0.17
TRAPPC4-208ENST00000527680 OR4B1Q8NGF8 309 aa16.1■□□□□ 0.17
TRAPPC4-208ENST00000527680 COQ8AQ8NI60 647 aa16.1■□□□□ 0.17
TRAPPC4-208ENST00000527680 VPS13DQ5THJ4 4388 aa16.1■□□□□ 0.17
TRAPPC4-208ENST00000527680 PIGBOS1A0A0B4J2F0 54 aa16.09■□□□□ 0.17
TRAPPC4-208ENST00000527680 TNFSF8P32971 234 aa16.09■□□□□ 0.17
TRAPPC4-208ENST00000527680 TMBIM6P55061 237 aa16.09■□□□□ 0.17
TRAPPC4-208ENST00000527680 DEFB1P60022 68 aa16.09■□□□□ 0.17
TRAPPC4-208ENST00000527680 RAB11AP62491 216 aa16.09■□□□□ 0.17
TRAPPC4-208ENST00000527680 GDF5OSQ5U4N7 250 aa16.09■□□□□ 0.17
TRAPPC4-208ENST00000527680 TMED4Q7Z7H5 227 aa16.09■□□□□ 0.17
TRAPPC4-208ENST00000527680 NDUFAF3Q9BU61 184 aa16.09■□□□□ 0.17
TRAPPC4-208ENST00000527680 WDR12Q9GZL7 423 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-208ENST00000527680 NOL3O60936 208 aaKnown RBP16.08■□□□□ 0.16
TRAPPC4-208ENST00000527680 SPART-AS1P0CW21 52 aa16.08■□□□□ 0.16
TRAPPC4-208ENST00000527680 FAUP35544 74 aaKnown RBP16.08■□□□□ 0.16
TRAPPC4-208ENST00000527680 OR8I2Q8N0Y5 310 aa16.08■□□□□ 0.16
TRAPPC4-208ENST00000527680 IGKV1D-37A0A075B6S9 117 aa16.07■□□□□ 0.16
TRAPPC4-208ENST00000527680 IAPPP10997 89 aa16.07■□□□□ 0.16
TRAPPC4-208ENST00000527680 C1orf194Q5T5A4 169 aa16.07■□□□□ 0.16
TRAPPC4-208ENST00000527680 FOXI2Q6ZQN5 318 aa16.07■□□□□ 0.16
TRAPPC4-208ENST00000527680 SAV1Q9H4B6 383 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC4-208ENST00000527680 SMIM9A6NGZ8 99 aa16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 P0DMU3 169 aa16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 FAM231AP0DMU4 169 aa16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 FAM231CP0DMU5 169 aa16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 PSMB3P49720 205 aa16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 EBLN2Q6P2I7 272 aa16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 GSG1LQ6UXU4 331 aa16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 ZNF705AQ6ZN79 300 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 NEU1Q99519 415 aa16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 BCL7BQ9BQE9 202 aa16.06■□□□□ 0.16
TRAPPC4-208ENST00000527680 TMEM189A5PLL7 270 aa16.05■□□□□ 0.16
TRAPPC4-208ENST00000527680 AMBPP02760 352 aa16.05■□□□□ 0.16
TRAPPC4-208ENST00000527680 VAMP1P23763 118 aa16.05■□□□□ 0.16
TRAPPC4-208ENST00000527680 POM121L12Q8N7R1 296 aa16.05■□□□□ 0.16
TRAPPC4-208ENST00000527680 MCFD2Q8NI22 146 aa16.05■□□□□ 0.16
TRAPPC4-208ENST00000527680 SCRT1Q9BWW7 348 aa16.05■□□□□ 0.16
TRAPPC4-208ENST00000527680 KRTAP17-1Q9BYP8 105 aa16.05■□□□□ 0.16
TRAPPC4-208ENST00000527680 DUXBA0A1W2PPF3 345 aa16.04■□□□□ 0.16
TRAPPC4-208ENST00000527680 MED6O75586 246 aa16.04■□□□□ 0.16
TRAPPC4-208ENST00000527680 PYDC2Q56P42 97 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms