RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 RPL36ALQ969Q0 106 aaKnown RBP6.04□□□□□ -1.44
CTNND1-216ENST00000527467 PDFQ9HBH1 243 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 PEMTQ9UBM1 199 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 COL4A1P02462 1669 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 MSGN1A6NI15 193 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 PRB3Q04118 309 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-216ENST00000527467 C8orf31Q8N9H6 132 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 UPK2O00526 184 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 PYY3Q5JQD4 70 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 OCC1Q8TAD7 63 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 REPIN1Q9BWE0 567 aaKnown RBP6.04□□□□□ -1.44
CTNND1-216ENST00000527467 MRPL27Q9P0M9 148 aaKnown RBP6.04□□□□□ -1.44
CTNND1-216ENST00000527467 TANC1Q9C0D5 1861 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 F6UB75 175 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 ATOX1O00244 68 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 NTN3O00634 580 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-216ENST00000527467 RAMP3O60896 148 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 ERCC8Q13216 396 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 LCN12Q6JVE5 192 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 ZNF664Q8N3J9 261 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 RLFQ13129 1914 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 SIP14410 1827 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 CACNA1BQ00975 2339 aa6.04□□□□□ -1.44
CTNND1-216ENST00000527467 D6R8Y8 96 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 CEACAM8P31997 349 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-216ENST00000527467 ZNF525Q8N782 197 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 RASL10BQ96S79 203 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 PATJQ8NI35 1801 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 IGHV5-51A0A0C4DH38 117 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 IGHV3-23P01764 117 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 PPIFP30405 207 aaKnown RBP6.03□□□□□ -1.44
CTNND1-216ENST00000527467 PSG4Q00888 419 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 SPINK14Q6IE38 97 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 Q96M66 194 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 KIAA1217Q5T5P2 1943 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 TAX1BP3O14907 124 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 CT62P0C5K7 136 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 IGFBP3P17936 291 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-216ENST00000527467 PVRIGQ6DKI7 326 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 LCNL1Q6ZST4 164 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 OR11H6Q8NGC7 330 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 UCN2Q96RP3 112 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 SPANXB1Q9NS25 103 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-216ENST00000527467 K7ERS5 55 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 ACYP1P07311 99 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 LINC00271P0C7V0 271 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 ZP4Q12836 540 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 CDCP2Q5VXM1 449 aa6.03□□□□□ -1.44
CTNND1-216ENST00000527467 C16orf47Q6ZP98 133 aaPredicted RBP6.03□□□□□ -1.44
CTNND1-216ENST00000527467 RNASE6Q93091 150 aaKnown RBP6.03□□□□□ -1.44
CTNND1-216ENST00000527467 COLCA2A8K830 154 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 ZFP36L1Q07352 338 aaKnown RBP6.02□□□□□ -1.45
CTNND1-216ENST00000527467 ZNF826PQ6ZT77 177 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 C1orf159Q96HA4 380 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 C20orf144Q9BQM9 153 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 OVOL1O14753 267 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 PRB2P02812 416 aaPredicted RBP6.02□□□□□ -1.45
CTNND1-216ENST00000527467 FGF6P10767 208 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 PLA2G2AP14555 144 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 MPZP25189 248 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 DAD1P61803 113 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 SS18Q15532 418 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 UBE2DNLQ8IWF7 75 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 TRBV5-7A0A0A0MS05 114 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 GREM1O60565 184 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 NPSP0C0P6 89 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 MUSTN1Q8IVN3 82 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 LEAP2Q969E1 77 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 PSCAO43653 123 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 TIMP3P35625 211 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 FAM104BQ5XKR9 115 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 CLEC19AQ6UXS0 136 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 COX14Q96I36 57 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 SPXQ9BT56 116 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 SMIM2Q9BVW6 85 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 FAM186AA6NE01 2351 aa6.02□□□□□ -1.45
CTNND1-216ENST00000527467 CXCL1P09341 107 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 ANXA2RQ3ZCQ2 193 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 C1orf162Q8NEQ5 155 aaPredicted RBP6.01□□□□□ -1.45
CTNND1-216ENST00000527467 GLMPQ8WWB7 406 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 RNF222A6NCQ9 220 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 TMEM158Q8WZ71 300 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 SCARF2Q96GP6 870 aaPredicted RBP6.01□□□□□ -1.45
CTNND1-216ENST00000527467 A0A1B0GWJ7 208 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 A0A1B0GX51 115 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 HOXB3P14651 431 aaPredicted RBP6.01□□□□□ -1.45
CTNND1-216ENST00000527467 CDKN1BP46527 198 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 FOXG1P55316 489 aaPredicted RBP6.01□□□□□ -1.45
CTNND1-216ENST00000527467 CD200R1LQ6Q8B3 271 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 PRSS41Q7RTY9 318 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 WFDC12Q8WWY7 111 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 S4R3C0 116 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 PTPRFP10586 1907 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 CABIN1Q9Y6J0 2220 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 FOXH1O75593 365 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 CELA3AP09093 270 aa6.01□□□□□ -1.45
CTNND1-216ENST00000527467 GATA2P23769 480 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms