RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 FAM74A1Q5RGS3 127 aa9.81□□□□□ -0.84
SSSCA1-203ENST00000526877 KPRPQ5T749 579 aaPredicted RBP9.81□□□□□ -0.84
SSSCA1-203ENST00000526877 SAMD5Q5TGI4 173 aa9.81□□□□□ -0.84
SSSCA1-203ENST00000526877 MIC13Q5XKP0 118 aa9.81□□□□□ -0.84
SSSCA1-203ENST00000526877 CLEC19AQ6UXS0 136 aa9.81□□□□□ -0.84
SSSCA1-203ENST00000526877 Q6ZRG5 221 aa9.81□□□□□ -0.84
SSSCA1-203ENST00000526877 BPIFCQ8NFQ6 507 aa9.81□□□□□ -0.84
SSSCA1-203ENST00000526877 RFNGQ9Y644 331 aa9.81□□□□□ -0.84
SSSCA1-203ENST00000526877 PRKDCP78527 4128 aaKnown RBP9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 OR2T8A6NH00 312 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 CLEC3BP05452 202 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 GPR183P32249 361 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 ELLP55199 621 aaPredicted RBP9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 YPEL3P61236 119 aaPredicted RBP9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 PRR20EP86478 221 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 PRR20CP86479 221 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 PRR20DP86480 221 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 PRR20BP86481 221 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 PRR20AP86496 221 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 ZNF90Q03938 601 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 ZNF616Q08AN1 781 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 TIGITQ495A1 244 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 TMEM41BQ5BJD5 291 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 SPSB3Q6PJ21 355 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 C10orf99Q6UWK7 81 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 STPG3Q8N7X2 389 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 OR4X2Q8NGF9 303 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 SLC39A9Q9NUM3 307 aa9.8□□□□□ -0.84
SSSCA1-203ENST00000526877 ZNF705EA8MWA4 302 aaPredicted RBP9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 F8W735 103 aaPredicted RBP9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 RD3LP0DJH9 198 aa9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 M6PRP20645 277 aa9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 BLOC1S1P78537 153 aa9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 LCNL1Q6ZST4 164 aa9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 ZNF491Q8N8L2 437 aa9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 RNF152Q8N8N0 203 aa9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 Q8WTZ3 238 aa9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 SAT2Q96F10 170 aaPredicted RBP9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
SSSCA1-203ENST00000526877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 TGOLN2O43493 480 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 TOMM40O96008 361 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 IGKV1-17P01599 117 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 IGHV3-11P01762 117 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 RPLP1P05386 114 aaKnown RBP9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 CTSGP08311 255 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 LINC00869P0C866 280 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 GATA2P23769 480 aaPredicted RBP9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 RAB2AP61019 212 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 PXDC1Q5TGL8 231 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 ZNF343Q6P1L6 599 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 WFDC9Q8NEX5 89 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 OR4F17Q8NGA8 305 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 OR1L4Q8NGR5 311 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 FAM213BQ8TBF2 198 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 OR4F4Q96R69 305 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 ACTR3CQ9C0K3 210 aaPredicted RBP9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 GNB4Q9HAV0 340 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 RPRMQ9NS64 109 aa9.78□□□□□ -0.84
SSSCA1-203ENST00000526877 A0A1W2PPV4 95 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 COX7A2P2O60397 106 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 YIF1AO95070 293 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 PSG1P11464 419 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 ARL3P36405 182 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 RELQ04864 619 aaPredicted RBP9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 OR51G1Q8NGK1 321 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 MYOZ3Q8TDC0 251 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 UBE2E2Q96LR5 201 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 PFDN5Q99471 154 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 RNF2Q99496 336 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 CHRDL1Q9BU40 450 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 VSIRQ9H7M9 311 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 DNAJC4Q9NNZ3 241 aa9.77□□□□□ -0.85
SSSCA1-203ENST00000526877 ELOA3CA0A087WX78 387 aaPredicted RBP9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 A0A1W2PRX2 142 aa9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 ANKRD34BA5PLL1 514 aa9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 TEX46H3BTG2 121 aa9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 RHOBP62745 196 aa9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 KIAA0141Q14154 515 aaPredicted RBP9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 CLLU1Q5K131 121 aa9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 FAM122CQ6P4D5 195 aa9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 ZNF600Q6ZNG1 722 aa9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 S100A7AQ86SG5 101 aa9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 GATAD1Q8WUU5 269 aa9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 PEF1Q9UBV8 284 aaKnown RBP9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 TSSC4Q9Y5U2 329 aaPredicted RBP9.76□□□□□ -0.85
SSSCA1-203ENST00000526877 GGCTO75223 188 aaKnown RBP9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 HYPMO75409 117 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 OR2C1O95371 312 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 PRB2P02812 416 aaPredicted RBP9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 NMBP08949 121 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 LGALS1P09382 135 aaKnown RBP9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
SSSCA1-203ENST00000526877 OR5G3P0C626 314 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms