RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 PSG1P11464 419 aa13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 DHRS2Q13268 280 aa13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 ASAH1Q13510 395 aa13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 USF2Q15853 346 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 OR8G2PQ6IF36 304 aa13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 C16orf54Q6UWD8 224 aa13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 LYG2Q86SG7 212 aa13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 GLMPQ8WWB7 406 aa13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 DYNC2H1Q8NCM8 4307 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 ZFP92A6NM28 416 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 MPTX1A8MV57 137 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 IFNA21P01568 189 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 IAPPP10997 89 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 ATF4P18848 351 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 DEFB131AP59861 70 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 DEFB135Q30KP9 77 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 STXBP6Q8NFX7 210 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 GATAD1Q8WUU5 269 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 SEPSECSQ9HD40 501 aaKnown RBP13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 FLVCR2Q9UPI3 526 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 LYSTQ99698 3801 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 TENM2Q9NT68 2774 aa13.59□□□□□ -0.23
TSPAN4-216ENST00000526055 CSMD3Q7Z407 3707 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 FAM240BA0A1B0GVZ2 78 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 BUB3O43684 328 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 DEFA1P59665 94 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 DEFA3P59666 94 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 ID3Q02535 119 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 ZNF124Q15973 351 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 C4orf46Q504U0 113 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 DCANP1Q8TF63 244 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 RNF125Q96EQ8 232 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 TRGV9Q99603 122 aa13.58□□□□□ -0.24
TSPAN4-216ENST00000526055 IGKV1D-37A0A075B6S9 117 aa13.57□□□□□ -0.24
TSPAN4-216ENST00000526055 WRBO00258 174 aa13.57□□□□□ -0.24
TSPAN4-216ENST00000526055 CFDP00746 253 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-216ENST00000526055 TCRBP04435 133 aa13.57□□□□□ -0.24
TSPAN4-216ENST00000526055 C20orf85Q9H1P6 137 aa13.57□□□□□ -0.24
TSPAN4-216ENST00000526055 TBC1D24Q9ULP9 559 aa13.57□□□□□ -0.24
TSPAN4-216ENST00000526055 SNRPGP15A8MWD9 76 aa13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 ADAP1O75689 374 aa13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 ANXA7P20073 488 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 TMEM41BQ5BJD5 291 aa13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 STHQ8IWL8 128 aa13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 FAM24BQ8N5W8 94 aa13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 TMEM217Q8N7C4 229 aa13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 THAP8Q8NA92 274 aa13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 ENKURQ8TC29 256 aa13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 MAGT1Q9H0U3 335 aa13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 PAIP2BQ9ULR5 123 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 STRAPQ9Y3F4 350 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-216ENST00000526055 LCE6AA0A183 80 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 PRSS46E5RG02 174 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 NKX2-1P43699 371 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 SPANXN5Q5MJ07 72 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 C1orf194Q5T5A4 169 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 LEMD1Q68G75 181 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 SIGLEC15Q6ZMC9 328 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 MITD1Q8WV92 249 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 NRN1Q9NPD7 142 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 STARD9Q9P2P6 4700 aa13.55□□□□□ -0.24
TSPAN4-216ENST00000526055 SNRPD3P62318 126 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-216ENST00000526055 ZNF90Q03938 601 aa13.54□□□□□ -0.24
TSPAN4-216ENST00000526055 FBXL17Q9UF56 701 aa13.54□□□□□ -0.24
TSPAN4-216ENST00000526055 A0A0J9YWU9 116 aa13.53□□□□□ -0.24
TSPAN4-216ENST00000526055 H2AFB2P0C5Z0 115 aa13.53□□□□□ -0.24
TSPAN4-216ENST00000526055 ZNF688P0C7X2 276 aa13.53□□□□□ -0.24
TSPAN4-216ENST00000526055 SPP1P10451 314 aa13.53□□□□□ -0.24
TSPAN4-216ENST00000526055 IFITM3Q01628 133 aa13.53□□□□□ -0.24
TSPAN4-216ENST00000526055 MORN3Q6PF18 240 aaPredicted RBP13.53□□□□□ -0.24
TSPAN4-216ENST00000526055 PBDC1Q9BVG4 233 aa13.53□□□□□ -0.24
TSPAN4-216ENST00000526055 SLC45A2Q9UMX9 530 aa13.53□□□□□ -0.24
TSPAN4-216ENST00000526055 TRAV6A0A075B6T7 132 aa13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 IGKV1OR2-108A0A075B7D4 117 aa13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 CA1P00915 261 aaPredicted RBP13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 S100A7P31151 101 aa13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 TAS2R30P59541 319 aa13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 POLR2GP62487 172 aaKnown RBP eCLIP13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 TRPT1Q86TN4 253 aaKnown RBP13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 SMIM8Q96KF7 97 aa13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 RAB40CQ96S21 281 aa13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 PSENENQ9NZ42 101 aa13.52□□□□□ -0.25
TSPAN4-216ENST00000526055 LYZP61626 148 aa13.51□□□□□ -0.25
TSPAN4-216ENST00000526055 IAH1Q2TAA2 248 aaPredicted RBP13.51□□□□□ -0.25
TSPAN4-216ENST00000526055 TMEM144Q7Z5S9 345 aa13.51□□□□□ -0.25
TSPAN4-216ENST00000526055 RARRES2Q99969 163 aa13.51□□□□□ -0.25
TSPAN4-216ENST00000526055 H3BP45 60 aa13.5□□□□□ -0.25
TSPAN4-216ENST00000526055 JTBO76095 146 aa13.5□□□□□ -0.25
TSPAN4-216ENST00000526055 AKR1C1Q04828 323 aa13.5□□□□□ -0.25
TSPAN4-216ENST00000526055 PSMG4Q5JS54 123 aa13.5□□□□□ -0.25
TSPAN4-216ENST00000526055 SAMD13Q5VXD3 122 aa13.5□□□□□ -0.25
TSPAN4-216ENST00000526055 C11orf68Q9H3H3 251 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-216ENST00000526055 FNDC10F2Z333 226 aa13.49□□□□□ -0.25
TSPAN4-216ENST00000526055 SSSCA1O60232 199 aa13.49□□□□□ -0.25
TSPAN4-216ENST00000526055 TSC22D2O75157 780 aa13.49□□□□□ -0.25
TSPAN4-216ENST00000526055 OR2F1Q13607 317 aa13.49□□□□□ -0.25
TSPAN4-216ENST00000526055 ACOT7LQ6ZUV0 252 aa13.49□□□□□ -0.25
TSPAN4-216ENST00000526055 NRARPQ7Z6K4 114 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms