RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 C5orf67F2Z3F1 127 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 GOLGA8MH3BSY2 632 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 FAAHO00519 579 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 YKT6O15498 198 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 SULT1B1O43704 296 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 DNAL4O96015 105 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 S100A9P06702 114 aaKnown RBP-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 COX5BP10606 129 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 CCL4P13236 92 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 KCNE1P15382 129 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 RPL12P30050 165 aaKnown RBP-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 RNASE4P34096 147 aaKnown RBP-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 IFITM2Q01629 132 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 MLLT11Q13015 90 aaPredicted RBP-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 RSU1Q15404 277 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 KHDC3LQ587J8 217 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 COQ5Q5HYK3 327 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 C1orf195Q5TG92 126 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 AADACL4Q5VUY2 407 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 HAGHLQ6PII5 290 aaPredicted RBP-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 C10orf99Q6UWK7 81 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 COMMD7Q86VX2 200 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 PRR15Q8IV56 129 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 FUNDC1Q8IVP5 155 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 Q8IYB0 196 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 LINC00471Q8N535 108 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 C12orf45Q8N5I9 185 aaPredicted RBP-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 TMEM86BQ8N661 226 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 LINC00301Q8NCQ3 95 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 ATP6V1C2Q8NEY4 427 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 OR13D1Q8NGV5 346 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 C4orf3Q8WVX3 66 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 PLAC4Q8WY50 150 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 ZNF75CPQ92670 426 aaPredicted RBP-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 GPR146Q96CH1 333 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 ZC2HC1AQ96GY0 325 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 DIRAS2Q96HU8 199 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 TSPAN32Q96QS1 320 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 LYSMD1Q96S90 227 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 OR51V1Q9H2C8 321 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 OR51I1Q9H343 314 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 MAP1LC3AQ9H492 121 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 PSTPIP2Q9H939 334 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 TREM1Q9NP99 234 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 XPNPEP1Q9NQW7 623 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 SPANXB1Q9NS25 103 aaPredicted RBP-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 PLEKHJ1Q9NW61 149 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 CMTM6Q9NX76 183 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 FBXL12Q9NXK8 326 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 TMEM14CQ9P0S9 112 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 EPDR1Q9UM22 224 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 ERGIC3Q9Y282 383 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 V9GYY5 206 aaPredicted RBP-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 PDZD2O15018 2839 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 STAB2Q8WWQ8 2551 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 SPTA1P02549 2419 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 MYH8P13535 1937 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 MYH13Q9UKX3 1938 aa-0.26□□□□□ -2.45
CSDE1-210ENST00000525878 ZNF142P52746 1687 aaPredicted RBP-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 LAMC3Q9Y6N6 1575 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 ACANP16112 2415 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 IGLV3-32A0A0A0MS00 114 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 EXOC1LA0A1B0GW35 172 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 NUPR2A6NF83 97 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 TRPC5OSA6NMA1 111 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 CXCR6O00574 342 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 PROSCO94903 275 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 DHFRP00374 187 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 TYMSP04818 313 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 CD14P08571 375 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 OR5G3P0C626 314 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 UGT2B7P16662 529 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 MYL12AP19105 171 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 HIST1H1TP22492 207 aaPredicted RBP-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 ROMO1P60602 79 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 HBA1P69905 142 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 QRFPP83859 136 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 TSNQ15631 228 aaKnown RBP-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 GRK1Q15835 563 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 ESRGQ1W209 222 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 LINC01554Q52M75 96 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 BRMS1LQ5PSV4 323 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 FAM74A1Q5RGS3 127 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 CST9Q5W186 159 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 LPCAT3Q6P1A2 487 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 HIST2H3AQ71DI3 136 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 LYG2Q86SG7 212 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 BPIFA4PQ86YQ2 179 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 IQCF2Q8IXL9 164 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 CLECL1Q8IZS7 167 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 HIST3H2BBQ8N257 126 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 MCFD2Q8NI22 146 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 Q8TAT8 98 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 TEX47Q8TBZ9 253 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 WFDC5Q8TCV5 224 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 PSMF1Q92530 271 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 SLC35B4Q969S0 331 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 TOMM6Q96B49 74 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 NIPSNAP1Q9BPW8 284 aa-0.27□□□□□ -2.45
CSDE1-210ENST00000525878 DCSTAMPQ9H295 470 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms