RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 SPANXN5Q5MJ07 72 aa13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 STXBP6Q8NFX7 210 aa13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 OR51G1Q8NGK1 321 aa13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 OVOL2Q9BRP0 275 aa13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 NUDT15Q9NV35 164 aa13.68□□□□□ -0.22
TSPAN4-215ENST00000525334 C16orf54Q6UWD8 224 aa13.67□□□□□ -0.22
TSPAN4-215ENST00000525334 GLMPQ8WWB7 406 aa13.67□□□□□ -0.22
TSPAN4-215ENST00000525334 RNF125Q96EQ8 232 aa13.67□□□□□ -0.22
TSPAN4-215ENST00000525334 STRAPQ9Y3F4 350 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-215ENST00000525334 KIR2DL5BA0A0G2JN68 375 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 KIR2DL5BA0A0G2JPC4 375 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 K7EQG2 157 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 SSSCA1O60232 199 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 DEFB131AP59861 70 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 IAH1Q2TAA2 248 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 KIR2DL5AQ8N109 375 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 KIR2DL5BQ8NHK3 375 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 PBDC1Q9BVG4 233 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 PTTG2Q9NZH5 202 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 TBC1D24Q9ULP9 559 aa13.66□□□□□ -0.22
TSPAN4-215ENST00000525334 STARD9Q9P2P6 4700 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 IGKV1OR2-108A0A075B7D4 117 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 HELTA6NFD8 242 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 UBE2CO00762 179 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 BUB3O43684 328 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 SCGB1D2O95969 90 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 EIF2B2P49770 351 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 DEFB135Q30KP9 77 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 LEMD1Q68G75 181 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 Q6ZWC4 215 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 STPG3Q8N7X2 389 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 THAP8Q8NA92 274 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 ZBTB8BQ8NAP8 495 aaPredicted RBP13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 DCANP1Q8TF63 244 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 TRGV9Q99603 122 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 SEC22CQ9BRL7 303 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 PSENENQ9NZ42 101 aa13.65□□□□□ -0.22
TSPAN4-215ENST00000525334 RYR3Q15413 4870 aa13.64□□□□□ -0.23
TSPAN4-215ENST00000525334 FABP1P07148 127 aa13.64□□□□□ -0.23
TSPAN4-215ENST00000525334 OR2F1Q13607 317 aa13.64□□□□□ -0.23
TSPAN4-215ENST00000525334 ZFAND6Q6FIF0 208 aa13.64□□□□□ -0.23
TSPAN4-215ENST00000525334 TP53TG1Q9Y2A0 90 aa13.64□□□□□ -0.23
TSPAN4-215ENST00000525334 FAM240BA0A1B0GVZ2 78 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 CCSO14618 274 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 H2AFB2P0C5Z0 115 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 AP2S1P53680 142 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 PAX9P55771 341 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 LYZP61626 148 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 ASAH1Q13510 395 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 OR8G2PQ6IF36 304 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 ACOT7LQ6ZUV0 252 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 ZNF431Q8TF32 576 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 SMIM8Q96KF7 97 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 WDR12Q9GZL7 423 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 GSKIPQ9P0R6 139 aa13.63□□□□□ -0.23
TSPAN4-215ENST00000525334 SNRPGP15A8MWD9 76 aa13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 SPRY2O43597 315 aa13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 ZNF688P0C7X2 276 aa13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 NUP62P37198 522 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 AKR1C1Q04828 323 aa13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 ZNF846Q147U1 533 aa13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 MZT2BQ6NZ67 158 aa13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 SIGLEC15Q6ZMC9 328 aa13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 RCL1Q9Y2P8 373 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 CSMD3Q7Z407 3707 aa13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 DYNC2H1Q8NCM8 4307 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-215ENST00000525334 PMS2P5A8MQ11 134 aa13.61□□□□□ -0.23
TSPAN4-215ENST00000525334 UPK1BO75841 260 aa13.61□□□□□ -0.23
TSPAN4-215ENST00000525334 RNF183Q96D59 192 aa13.61□□□□□ -0.23
TSPAN4-215ENST00000525334 RAB40CQ96S21 281 aa13.61□□□□□ -0.23
TSPAN4-215ENST00000525334 CSTL1Q9H114 145 aa13.61□□□□□ -0.23
TSPAN4-215ENST00000525334 FAM25EA8MYX2 175 aa13.6□□□□□ -0.23
TSPAN4-215ENST00000525334 CCNKO75909 580 aa13.6□□□□□ -0.23
TSPAN4-215ENST00000525334 MBPP02686 304 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-215ENST00000525334 TMEM14EPQ6UXP3 125 aa13.6□□□□□ -0.23
TSPAN4-215ENST00000525334 C12orf45Q8N5I9 185 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-215ENST00000525334 NRN1Q9NPD7 142 aa13.6□□□□□ -0.23
TSPAN4-215ENST00000525334 PFDN2Q9UHV9 154 aa13.6□□□□□ -0.23
TSPAN4-215ENST00000525334 TENM2Q9NT68 2774 aa13.59□□□□□ -0.23
TSPAN4-215ENST00000525334 SMCO3A2RU48 225 aa13.59□□□□□ -0.23
TSPAN4-215ENST00000525334 METTL15P1P0C7V9 234 aa13.59□□□□□ -0.23
TSPAN4-215ENST00000525334 TAS2R30P59541 319 aa13.59□□□□□ -0.23
TSPAN4-215ENST00000525334 IFITM3Q01628 133 aa13.59□□□□□ -0.23
TSPAN4-215ENST00000525334 KNCNA6PVL3 124 aa13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 TSC22D2O75157 780 aa13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 CFDP00746 253 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 GATA2P23769 480 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 PSMG4Q5JS54 123 aa13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 TMEM182Q6ZP80 229 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 TMEM144Q7Z5S9 345 aa13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 STHQ8IWL8 128 aa13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 ENKURQ8TC29 256 aa13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 PPP1R14BQ96C90 147 aa13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 BATF3Q9NR55 127 aa13.58□□□□□ -0.24
TSPAN4-215ENST00000525334 C7orf66A4D0T2 115 aa13.57□□□□□ -0.24
TSPAN4-215ENST00000525334 C5orf51A6NDU8 294 aa13.57□□□□□ -0.24
TSPAN4-215ENST00000525334 CA1P00915 261 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-215ENST00000525334 RRAS2P62070 204 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-215ENST00000525334 DLK1P80370 383 aa13.57□□□□□ -0.24
TSPAN4-215ENST00000525334 C1orf194Q5T5A4 169 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms