RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 LYRM2Q9NU23 88 aaPredicted RBP3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 CACFD1Q9UGQ2 172 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 UBQLN2Q9UHD9 624 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 SMPXQ9UHP9 88 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 ZNF256Q9Y2P7 627 aaPredicted RBP3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 TNCP24821 2201 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 ANK2Q01484 3957 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 TRAV30A0A087WSZ9 112 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 A8MWP6 167 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 E5RGE8 158 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 AGPAT2O15120 278 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 DFFBO76075 338 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 TOMM40O96008 361 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 OR5G3P0C626 314 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 FGF7P21781 194 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 RPL12P30050 165 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 FCGR2BP31994 310 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 P2RY1P47900 373 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 SULT1A1P50225 295 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 YPEL3P61236 119 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 DLK1P80370 383 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 CYCSP99999 105 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 BAXQ07812 192 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 CD300CQ08708 224 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 EGFEM1PQ0D2K5 195 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 ZNF124Q15973 351 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 KPRPQ5T749 579 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 MIC13Q5XKP0 118 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 Q6ZNX1 250 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 RBPMS2Q6ZRY4 209 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 CYP2G1PQ6ZSU1 146 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 TCF24Q7RTU0 167 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 TMEM144Q7Z5S9 345 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 FAM24BQ8N5W8 94 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 DEFB125Q8N687 156 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 STPG3Q8N7X2 389 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 THAP8Q8NA92 274 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 BPIFCQ8NFQ6 507 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 OR5C1Q8NGR4 320 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 OR1B1Q8NGR6 318 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 OR2T35Q8NGX2 323 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 PPP1R14BQ96C90 147 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 RNF125Q96EQ8 232 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 UHRF2Q96PU4 802 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 ASCL2Q99929 193 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 SLC25A22Q9H936 323 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 NPVFQ9HCQ7 196 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 UQCC1Q9NVA1 299 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 GAR1Q9NY12 217 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 MRPL27Q9P0M9 148 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 RABAC1Q9UI14 185 aa3.46□□□□□ -1.86
CHMP4A-202ENST00000524955 TRAV5A0A0B4J249 113 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 G3V3Q6 166 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 H3BTX0 84 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 K7EMT4 169 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 WIPF1O43516 503 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 SCGB2A1O75556 95 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 HNRNPCP07910 306 aaKnown RBP eCLIP3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 GIPP09681 153 aaPredicted RBP3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 LINC00869P0C866 280 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 C8orf88P0DMB2 117 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 CRYBB3P26998 211 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 S100A11P31949 105 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 INSL3P51460 131 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 ATP5IP56385 69 aaPredicted RBP3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 DEFB1P60022 68 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 CD81P60033 236 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 GCSAMLQ5JQS6 135 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 MORN5Q5VZ52 161 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 IGFL4Q6B9Z1 124 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 LCN12Q6JVE5 192 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 TEPPQ6URK8 271 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 PATE2Q6UY27 113 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 STX12Q86Y82 276 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 APRG1Q8IVJ8 170 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 Q8N1Y9 231 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 STXBP6Q8NFX7 210 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 METTL26Q96S19 204 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 ATP6V0BQ99437 205 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 TRGV9Q99603 122 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 GINS3Q9BRX5 216 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 RSG1Q9BU20 258 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 TMEM147Q9BVK8 224 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 SCRT1Q9BWW7 348 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 GGTLC1Q9BX51 225 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 SLC25A31Q9H0C2 315 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 ARL6Q9H0F7 186 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 SLC45A2Q9UMX9 530 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 WDR83OSQ9Y284 106 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 HSPB11Q9Y547 144 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 PKD1L1Q8TDX9 2849 aa3.45□□□□□ -1.86
CHMP4A-202ENST00000524955 RNF222A6NCQ9 220 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 DNASE2O00115 360 aaPredicted RBP3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 ARPC5O15511 151 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 ZNF688P0C7X2 276 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 PET100P0DJ07 73 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 IGHV4-30-4P0DP06 118 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 LYL1P12980 280 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 CAMLGP49069 296 aa3.44□□□□□ -1.86
CHMP4A-202ENST00000524955 EIF2B2P49770 351 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms