RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 HBE1P02100 147 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 ZNF726P1Q15940 193 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 SPSB3Q6PJ21 355 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 COMMD7Q86VX2 200 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 OR51G1Q8NGK1 321 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 RAB24Q969Q5 203 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 RNF2Q99496 336 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 GNB4Q9HAV0 340 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 DNAJC4Q9NNZ3 241 aa11.69□□□□□ -0.54
HMBOX1-210ENST00000523613 ELOA3CA0A087WX78 387 aaPredicted RBP11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 TGOLN2O43493 480 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 HYPMO75409 117 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 IGHV3-11P01762 117 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 OR5G3P0C626 314 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 ORM2P19652 201 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 LYZP61626 148 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 FAM209BQ5JX69 171 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 C10orf113Q5VZT2 155 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 LCN15Q6UWW0 184 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 OR1B1Q8NGR6 318 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 MBD3L1Q8WWY6 194 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 CHRDL1Q9BU40 450 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
HMBOX1-210ENST00000523613 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 A0A1B0GV50 99 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 NDUFA7O95182 113 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 RPLP1P05386 114 aaKnown RBP11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 ADMP35318 185 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 ARL3P36405 182 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 PLP1P60201 277 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 FAM78BQ5VT40 261 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 ZNF343Q6P1L6 599 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 ZNF600Q6ZNG1 722 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 SSX7Q7RTT5 188 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 OR4X2Q8NGF9 303 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 LYPD6BQ8NI32 183 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 PBDC1Q9BVG4 233 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 FUT9Q9Y231 359 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 MTORP42345 2549 aa11.67□□□□□ -0.54
HMBOX1-210ENST00000523613 TRAV1-1A0A0B4J248 108 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 NUDT19A8MXV4 375 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 IL4P05112 153 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 RELQ04864 619 aaPredicted RBP11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 RNF152Q8N8N0 203 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 OR5AU1Q8NGC0 362 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 TMEM37Q8WXS4 190 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 CITED4Q96RK1 184 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 MRPL32Q9BYC8 188 aaKnown RBP11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 SEPSECSQ9HD40 501 aaKnown RBP11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 ANKRD34BA5PLL1 514 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 PPP5D1E7EU14 171 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 HMGB3O15347 200 aaKnown RBP11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 OR2C1O95371 312 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 FGF8P55075 233 aaPredicted RBP11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 PATE2Q6UY27 113 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 IL34Q6ZMJ4 242 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 EIF4E3Q8N5X7 224 aaKnown RBP11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 ZNF491Q8N8L2 437 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 OR4F5Q8NH21 305 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 RNF125Q96EQ8 232 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 HIGD1AQ9Y241 93 aa11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 PUS1Q9Y606 427 aaKnown RBP eCLIP11.66□□□□□ -0.54
HMBOX1-210ENST00000523613 ZFHX3Q15911 3703 aa11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 WI2-2373I1.2A0A1W2PRP0 233 aa11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 EIF3GO75821 320 aaKnown RBP eCLIP11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 TAS2R45P59539 299 aa11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 KIAA0141Q14154 515 aaPredicted RBP11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 SPATA31B1PQ5VZV4 182 aa11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 LINC01006Q8NI28 216 aa11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 MARC2Q969Z3 335 aa11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 TECRQ9NZ01 308 aaKnown RBP11.65□□□□□ -0.54
HMBOX1-210ENST00000523613 F8P00451 2351 aa11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 IGHV3-35A0A0C4DH35 117 aa11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 LINC00305Q7Z4B0 112 aa11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 UBE2E2Q96LR5 201 aa11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 UHRF2Q96PU4 802 aa11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 OR5B12Q96R08 314 aa11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 PEF1Q9UBV8 284 aaKnown RBP11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 SETXQ7Z333 2677 aaKnown RBP11.64□□□□□ -0.55
HMBOX1-210ENST00000523613 ANK3Q12955 4377 aaKnown RBP11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 CXorf1O96002 111 aa11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 TRBV12-3P01733 135 aa11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 STAG3L2P0CL84 134 aa11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 STAG3L3P0CL85 134 aa11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 KHDC3LQ587J8 217 aa11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 IQCF2Q8IXL9 164 aa11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 MRPL27Q9P0M9 148 aaKnown RBP11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 FN1P02751 2386 aaKnown RBP11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 BMPR1BO00238 502 aa11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 LGALS1P09382 135 aaKnown RBP11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 C8orf88P0DMB2 117 aa11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 CCL20P78556 96 aa11.63□□□□□ -0.55
HMBOX1-210ENST00000523613 GGCTO75223 188 aaKnown RBP11.62□□□□□ -0.55
HMBOX1-210ENST00000523613 ARL14EPLP0DKL9 152 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms