RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 DDTP30046 118 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 Q6ZN92 141 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 NPFFR1Q9GZQ6 430 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 IL36BQ9NZH7 164 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 PKIAP61925 76 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 MINOS1Q5TGZ0 78 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 C11orf53Q8IXP5 236 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 GPR82Q96P67 336 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 MINOS1-NBL1R4GNA1 71 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 A0A1W2PRE2 83 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 UQCRFS1P47985 274 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 VAMP3Q15836 100 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 ZNF841Q6ZN19 808 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 OCC1Q8TAD7 63 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 SELENOKQ9Y6D0 94 aa10.64□□□□□ -0.71
PCDHGB1-201ENST00000523390 B4DSR2 109 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 C15orf32Q32M92 178 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 LYPD6Q86Y78 171 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 C11orf44Q8N8P7 122 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 DDB2Q92466 427 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 A0A1W2PRX2 142 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 NPFFO15130 113 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 ZNF134P52741 427 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 TAS2R60P59551 318 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 RPS20P60866 119 aaKnown RBP10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 SNRPD3P62318 126 aaKnown RBP10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 SPRNQ5BIV9 151 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 C15orf65H3BRN8 121 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 ITGB1BP1O14713 200 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 RNASE2P10153 161 aaKnown RBP10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 SAA4P35542 130 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 Q8NFD4 153 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 SSC4DQ8WTU2 575 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 ELOVL1Q9BW60 279 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 LAMA2P24043 3122 aaKnown RBP10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 M0QZK8 103 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 HOXA5P20719 270 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 SEM1Q6ZVN7 128 aa10.63□□□□□ -0.71
PCDHGB1-201ENST00000523390 OOSP1A8MZH6 123 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 NDUFS7O75251 213 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 EPDR1Q9UM22 224 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 MOB4Q9Y3A3 225 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 A0A087WWC5 75 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 TRAV41A0A0B4J266 112 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 CXCL1P09341 107 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 BTF3P20290 206 aaKnown RBP10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 HBBP68871 147 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 MAPK1IP1LQ8NDC0 245 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 SCRT1Q9BWW7 348 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 PAX9P55771 341 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 CYB5R2Q6BCY4 276 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 PRSS22Q9GZN4 317 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 F11RQ9Y624 299 aaKnown RBP10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 MYO9AB2RTY4 2548 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 A0A1W2PPI3 338 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 C10orf142B7Z368 130 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 RNF5Q99942 180 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 AGMATQ9BSE5 352 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 DERL1Q9BUN8 251 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 OTORQ9NRC9 128 aa10.62□□□□□ -0.71
PCDHGB1-201ENST00000523390 TRAV1-1A0A0B4J248 108 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 A0A1B0GWJ7 208 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 CNTFRP26992 372 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 FAM74A4Q5TZK3 123 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 ATG101Q9BSB4 218 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 A6NNC1 897 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 PMS2P5A8MQ11 134 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 PYY3Q5JQD4 70 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 TEX36Q5VZQ5 186 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 OR4X2Q8NGF9 303 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 MYOZ3Q8TDC0 251 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 TMEM8BA6NDV4 472 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 FOLR2P14207 255 aa10.61□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST1H2BKO60814 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 LEPROTL1O95214 131 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST1H2BJP06899 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST1H2BOP23527 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST1H2BBP33778 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST1H2BDP58876 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 DSCR9P59020 149 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST1H2BCP62807 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST2H2BEQ16778 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 FAM159AQ6UWV7 190 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 TCF23Q7RTU1 214 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST1H2BHQ93079 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST1H2BNQ99877 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 HIST1H2BMQ99879 126 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 RPP21Q9H633 154 aaKnown RBP10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 M0R381 172 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 SOD3P08294 240 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 RPL15P61313 204 aaKnown RBP10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 C8orf46Q8TAG6 207 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 GLMPQ8WWB7 406 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 FMC1Q96HJ9 113 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 DIAPH2-AS1Q14236 149 aa10.6□□□□□ -0.71
PCDHGB1-201ENST00000523390 C21orf62-AS1Q17RA5 79 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms