RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 CNTFRP26992 372 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 S100A7P31151 101 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 PLA2G5P39877 138 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 RPS10P46783 165 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 GALR1P47211 349 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 UBE2G2P60604 165 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 YPEL3P61236 119 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 UBE2L3P68036 154 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 RPL19P84098 196 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 FXYD3Q14802 87 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 SMUG1Q53HV7 270 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 TTC9CQ8N5M4 171 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 OR5AU1Q8NGC0 362 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 C2CD4CQ8TF44 421 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 ARPC1AQ92747 370 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 SFRP2Q96HF1 295 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 RAX2Q96IS3 184 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 ATP6V0BQ99437 205 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 TXN2Q99757 166 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 PIMREGQ9BSJ6 248 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 PAXXQ9BUH6 204 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 BPESC1Q9GZL8 116 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 OR51M1Q9H341 326 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 ZNF355PQ9NSJ1 428 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 THYN1Q9P016 225 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 CDC42EP3Q9UKI2 254 aa5.3□□□□□ -1.56
CTNNA1-228ENST00000521640 ABCA4P78363 2273 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 TRBV20OR9-2A0A075B6H5 130 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 IGLV11-55A0A075B6I3 123 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 TGIF2-C20orf24A0A0A6YYL0 155 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 GGTLC3B5MD39 225 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 PPP5D1E7EU14 171 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 K7EIM0 57 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 ISLRO14498 428 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 PHOX2AO14813 284 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 EIF3GO75821 320 aaKnown RBP eCLIP5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 CNIH1O95406 144 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 TOMM40O96008 361 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 IGHV4-39P01824 125 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 SMIM6P0DI80 62 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 MYCNOSP40205 109 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 RPL35P42766 123 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 PAX8Q06710 450 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 KLRD1Q13241 179 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 KIAA0141Q14154 515 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 COX19Q49B96 90 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 ZNF343Q6P1L6 599 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 TEX38Q6PEX7 206 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 PATE2Q6UY27 113 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 LHFPL4Q7Z7J7 247 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 LINC00518Q8N0U6 118 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 ARL6IP6Q8N6S5 226 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 C10orf105Q8TEF2 133 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 FXYD5Q96DB9 178 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 FAM122AQ96E09 287 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 RBM14Q96PK6 669 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 TBX15Q96SF7 602 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 RASL11BQ9BPW5 248 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 MEGF9Q9H1U4 602 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 SAV1Q9H4B6 383 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 OSTCQ9NRP0 149 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 GAR1Q9NY12 217 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 MRPL36Q9P0J6 103 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 NCOR2Q9Y618 2525 aa5.29□□□□□ -1.56
CTNNA1-228ENST00000521640 ATRXP46100 2492 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 TRBV9A0A0B4J1U6 114 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 TRBV6-1A0A0K0K1D8 114 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 HELTA6NFD8 242 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 FCN1O00602 326 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 BRI3O95415 125 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 GCGP01275 180 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 REG1AP05451 166 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 GP9P14770 177 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 TMEM11P17152 192 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 GATA2P23769 480 aaPredicted RBP5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 GATA3P23771 443 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 GNG4P50150 75 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 CNN1P51911 297 aaKnown RBP5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 CRIP2P52943 208 aaPredicted RBP5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 DLX1P56177 255 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 CX3CL1P78423 397 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 ZNF90Q03938 601 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 HES1Q14469 280 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 TIGITQ495A1 244 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 COA6Q5JTJ3 125 aaKnown RBP5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 CLEC2AQ6UVW9 174 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 FAM231DQ6ZW35 169 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 LINC00305Q7Z4B0 112 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 LYPD1Q8N2G4 141 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 OR10G8Q8NGN5 311 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 VN1R17PQ8TDU5 208 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 IGF2BP2-AS1Q96M15 143 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 CCL19Q99731 98 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 CHRDL1Q9BU40 450 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 DERL1Q9BUN8 251 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 IL36BQ9NZH7 164 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 MRPL27Q9P0M9 148 aaKnown RBP5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 HIGD1AQ9Y241 93 aa5.28□□□□□ -1.56
CTNNA1-228ENST00000521640 KLF12Q9Y4X4 402 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms