RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 LINC00854A0A1B0GVQ3 168 aa15.78■□□□□ 0.12
HOXA3-204ENST00000521401 ZNF688P0C7X2 276 aa15.78■□□□□ 0.12
HOXA3-204ENST00000521401 SLC35E1Q96K37 410 aa15.78■□□□□ 0.12
HOXA3-204ENST00000521401 MAGT1Q9H0U3 335 aa15.78■□□□□ 0.12
HOXA3-204ENST00000521401 HELTA6NFD8 242 aa15.77■□□□□ 0.12
HOXA3-204ENST00000521401 PRSS46E5RG02 174 aa15.77■□□□□ 0.12
HOXA3-204ENST00000521401 SYNGR2O43760 224 aa15.77■□□□□ 0.12
HOXA3-204ENST00000521401 MED6O75586 246 aa15.77■□□□□ 0.12
HOXA3-204ENST00000521401 ADAP1O75689 374 aa15.77■□□□□ 0.12
HOXA3-204ENST00000521401 IL7P13232 177 aa15.77■□□□□ 0.12
HOXA3-204ENST00000521401 ATF4P18848 351 aaPredicted RBP15.77■□□□□ 0.12
HOXA3-204ENST00000521401 RAB11AP62491 216 aa15.77■□□□□ 0.12
HOXA3-204ENST00000521401 GATAD1Q8WUU5 269 aa15.77■□□□□ 0.12
HOXA3-204ENST00000521401 RNF125Q96EQ8 232 aa15.77■□□□□ 0.12
HOXA3-204ENST00000521401 IGKV1OR2-108A0A075B7D4 117 aa15.76■□□□□ 0.11
HOXA3-204ENST00000521401 ZFP92A6NM28 416 aa15.76■□□□□ 0.11
HOXA3-204ENST00000521401 GIG44P09565 113 aaPredicted RBP15.76■□□□□ 0.11
HOXA3-204ENST00000521401 AP2S1P53680 142 aaPredicted RBP15.76■□□□□ 0.11
HOXA3-204ENST00000521401 DHRS2Q13268 280 aa15.76■□□□□ 0.11
HOXA3-204ENST00000521401 TRPT1Q86TN4 253 aaKnown RBP15.76■□□□□ 0.11
HOXA3-204ENST00000521401 CIB3Q96Q77 187 aaPredicted RBP15.76■□□□□ 0.11
HOXA3-204ENST00000521401 NDUFA13Q9P0J0 144 aa15.76■□□□□ 0.11
HOXA3-204ENST00000521401 KNCNA6PVL3 124 aa15.75■□□□□ 0.11
HOXA3-204ENST00000521401 WRBO00258 174 aa15.75■□□□□ 0.11
HOXA3-204ENST00000521401 CA1P00915 261 aaPredicted RBP15.75■□□□□ 0.11
HOXA3-204ENST00000521401 OR4E1P0C645 316 aa15.75■□□□□ 0.11
HOXA3-204ENST00000521401 ANXA7P20073 488 aaKnown RBP15.75■□□□□ 0.11
HOXA3-204ENST00000521401 EIF2B2P49770 351 aaKnown RBP15.75■□□□□ 0.11
HOXA3-204ENST00000521401 ID3Q02535 119 aa15.75■□□□□ 0.11
HOXA3-204ENST00000521401 STHQ8IWL8 128 aa15.75■□□□□ 0.11
HOXA3-204ENST00000521401 THAP8Q8NA92 274 aa15.75■□□□□ 0.11
HOXA3-204ENST00000521401 C7orf50Q9BRJ6 194 aaKnown RBP15.75■□□□□ 0.11
HOXA3-204ENST00000521401 OR8G2PQ6IF36 304 aa15.74■□□□□ 0.11
HOXA3-204ENST00000521401 TRGV9Q99603 122 aa15.74■□□□□ 0.11
HOXA3-204ENST00000521401 RARRES2Q99969 163 aa15.74■□□□□ 0.11
HOXA3-204ENST00000521401 PAIP2BQ9ULR5 123 aaKnown RBP15.74■□□□□ 0.11
HOXA3-204ENST00000521401 PLA2G10O15496 165 aa15.73■□□□□ 0.11
HOXA3-204ENST00000521401 PMS2P11Q13670 270 aa15.73■□□□□ 0.11
HOXA3-204ENST00000521401 SIGLEC15Q6ZMC9 328 aa15.73■□□□□ 0.11
HOXA3-204ENST00000521401 OR4D5Q8NGN0 318 aa15.73■□□□□ 0.11
HOXA3-204ENST00000521401 OR11H2Q8NH07 326 aa15.73■□□□□ 0.11
HOXA3-204ENST00000521401 COQ8AQ8NI60 647 aa15.73■□□□□ 0.11
HOXA3-204ENST00000521401 PBDC1Q9BVG4 233 aa15.73■□□□□ 0.11
HOXA3-204ENST00000521401 NRN1Q9NPD7 142 aa15.73■□□□□ 0.11
HOXA3-204ENST00000521401 CENPXA8MT69 81 aa15.72■□□□□ 0.11
HOXA3-204ENST00000521401 POLR2GP62487 172 aaKnown RBP eCLIP15.72■□□□□ 0.11
HOXA3-204ENST00000521401 RPP30P78346 268 aaKnown RBP15.72■□□□□ 0.11
HOXA3-204ENST00000521401 OR2F1Q13607 317 aa15.72■□□□□ 0.11
HOXA3-204ENST00000521401 PSMG4Q5JS54 123 aa15.72■□□□□ 0.11
HOXA3-204ENST00000521401 SPANXN5Q5MJ07 72 aa15.72■□□□□ 0.11
HOXA3-204ENST00000521401 RAB40CQ96S21 281 aa15.72■□□□□ 0.11
HOXA3-204ENST00000521401 SEPSECSQ9HD40 501 aaKnown RBP15.72■□□□□ 0.11
HOXA3-204ENST00000521401 CXorf65A6NEN9 183 aa15.71■□□□□ 0.11
HOXA3-204ENST00000521401 H3BP45 60 aa15.71■□□□□ 0.11
HOXA3-204ENST00000521401 JTBO76095 146 aa15.71■□□□□ 0.11
HOXA3-204ENST00000521401 LYZP61626 148 aa15.71■□□□□ 0.11
HOXA3-204ENST00000521401 ACTL10Q5JWF8 245 aa15.71■□□□□ 0.11
HOXA3-204ENST00000521401 TMEM217Q8N7C4 229 aa15.71■□□□□ 0.11
HOXA3-204ENST00000521401 SNRPGP15A8MWD9 76 aa15.7■□□□□ 0.1
HOXA3-204ENST00000521401 C4BPBP20851 252 aa15.7■□□□□ 0.1
HOXA3-204ENST00000521401 C4orf46Q504U0 113 aa15.7■□□□□ 0.1
HOXA3-204ENST00000521401 PMS2P5A8MQ11 134 aa15.69■□□□□ 0.1
HOXA3-204ENST00000521401 FABP1P07148 127 aa15.69■□□□□ 0.1
HOXA3-204ENST00000521401 SPP1P10451 314 aa15.69■□□□□ 0.1
HOXA3-204ENST00000521401 NUP62P37198 522 aaPredicted RBP15.69■□□□□ 0.1
HOXA3-204ENST00000521401 NKX2-1P43699 371 aaPredicted RBP15.69■□□□□ 0.1
HOXA3-204ENST00000521401 MORN3Q6PF18 240 aaPredicted RBP15.69■□□□□ 0.1
HOXA3-204ENST00000521401 CEMP1Q6PRD7 247 aaPredicted RBP15.69■□□□□ 0.1
HOXA3-204ENST00000521401 TMEM182Q6ZP80 229 aaPredicted RBP15.69■□□□□ 0.1
HOXA3-204ENST00000521401 MITD1Q8WV92 249 aa15.69■□□□□ 0.1
HOXA3-204ENST00000521401 C11orf68Q9H3H3 251 aaKnown RBP15.69■□□□□ 0.1
HOXA3-204ENST00000521401 STRAPQ9Y3F4 350 aaKnown RBP15.69■□□□□ 0.1
HOXA3-204ENST00000521401 EPPK1P58107 5090 aaKnown RBP15.69■□□□□ 0.1
HOXA3-204ENST00000521401 IFNA21P01568 189 aa15.68■□□□□ 0.1
HOXA3-204ENST00000521401 PAX9P55771 341 aa15.68■□□□□ 0.1
HOXA3-204ENST00000521401 CNPY1Q3B7I2 92 aa15.68■□□□□ 0.1
HOXA3-204ENST00000521401 C1orf194Q5T5A4 169 aa15.68■□□□□ 0.1
HOXA3-204ENST00000521401 ACOT7LQ6ZUV0 252 aa15.68■□□□□ 0.1
HOXA3-204ENST00000521401 WDR12Q9GZL7 423 aaKnown RBP15.68■□□□□ 0.1
HOXA3-204ENST00000521401 NUPR2A6NF83 97 aa15.67■□□□□ 0.1
HOXA3-204ENST00000521401 LYRM1O43325 122 aa15.67■□□□□ 0.1
HOXA3-204ENST00000521401 SNRPD3P62318 126 aaKnown RBP15.67■□□□□ 0.1
HOXA3-204ENST00000521401 CSNK1G2-AS1Q8NCQ2 148 aa15.67■□□□□ 0.1
HOXA3-204ENST00000521401 C20orf85Q9H1P6 137 aa15.67■□□□□ 0.1
HOXA3-204ENST00000521401 PSENENQ9NZ42 101 aa15.67■□□□□ 0.1
HOXA3-204ENST00000521401 PFDN2Q9UHV9 154 aa15.67■□□□□ 0.1
HOXA3-204ENST00000521401 SOCS3O14543 225 aa15.66■□□□□ 0.1
HOXA3-204ENST00000521401 DEFB4AO15263 64 aa15.66■□□□□ 0.1
HOXA3-204ENST00000521401 GATA2P23769 480 aaPredicted RBP15.66■□□□□ 0.1
HOXA3-204ENST00000521401 TMEM41BQ5BJD5 291 aa15.66■□□□□ 0.1
HOXA3-204ENST00000521401 GSG1LQ6UXU4 331 aa15.66■□□□□ 0.1
HOXA3-204ENST00000521401 Q8NAQ8 132 aa15.66■□□□□ 0.1
HOXA3-204ENST00000521401 SMIM8Q96KF7 97 aa15.66■□□□□ 0.1
HOXA3-204ENST00000521401 AGRNO00468 2067 aa15.65■□□□□ 0.1
HOXA3-204ENST00000521401 ZNF705EA8MWA4 302 aaPredicted RBP15.65■□□□□ 0.1
HOXA3-204ENST00000521401 H3BMM0 161 aa15.65■□□□□ 0.1
HOXA3-204ENST00000521401 SSSCA1O60232 199 aa15.65■□□□□ 0.1
HOXA3-204ENST00000521401 CCNKO75909 580 aa15.65■□□□□ 0.1
HOXA3-204ENST00000521401 CFDP00746 253 aaPredicted RBP15.65■□□□□ 0.1
HOXA3-204ENST00000521401 IAH1Q2TAA2 248 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 794.7 ms