RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 OPCMLQ14982 345 aa11.7□□□□□ -0.54
LSM1-203ENST00000520755 UNQ9165/PRO28630Q6UXU0 137 aa11.7□□□□□ -0.54
LSM1-203ENST00000520755 CYP2G1PQ6ZSU1 146 aa11.7□□□□□ -0.54
LSM1-203ENST00000520755 RCC1LQ96I51 464 aaKnown RBP11.7□□□□□ -0.54
LSM1-203ENST00000520755 RSG1Q9BU20 258 aa11.7□□□□□ -0.54
LSM1-203ENST00000520755 SLC45A2Q9UMX9 530 aa11.7□□□□□ -0.54
LSM1-203ENST00000520755 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
LSM1-203ENST00000520755 TAAR5O14804 337 aa11.69□□□□□ -0.54
LSM1-203ENST00000520755 TOMM40O96008 361 aa11.69□□□□□ -0.54
LSM1-203ENST00000520755 PSG1P11464 419 aa11.69□□□□□ -0.54
LSM1-203ENST00000520755 KLF5Q13887 457 aaPredicted RBP11.69□□□□□ -0.54
LSM1-203ENST00000520755 ZNF266Q14584 549 aa11.69□□□□□ -0.54
LSM1-203ENST00000520755 ZNF600Q6ZNG1 722 aa11.69□□□□□ -0.54
LSM1-203ENST00000520755 ARV1Q9H2C2 271 aa11.69□□□□□ -0.54
LSM1-203ENST00000520755 IGHV3OR16-8A0A075B7F1 116 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 KANTRA0A1W2PQU2 76 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 SEC14L6B5MCN3 397 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 MPDU1O75352 247 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 IFNA5P01569 189 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 HNRNPCP07910 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
LSM1-203ENST00000520755 LINC00869P0C866 280 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 CAMLGP49069 296 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 PRR20EP86478 221 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 PRR20CP86479 221 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 PRR20DP86480 221 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 PRR20BP86481 221 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 PRR20AP86496 221 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 OXLD1Q5BKU9 147 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 MIC13Q5XKP0 118 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 TOMM20LQ6UXN7 152 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 C1QL4Q86Z23 238 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 HSD17B11Q8NBQ5 300 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 TMEM190Q8WZ59 177 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 MCRIP2Q9BUT9 160 aaKnown RBP11.68□□□□□ -0.54
LSM1-203ENST00000520755 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
LSM1-203ENST00000520755 PUS1Q9Y606 427 aaKnown RBP eCLIP11.68□□□□□ -0.54
LSM1-203ENST00000520755 ZNF320A2RRD8 509 aa11.67□□□□□ -0.54
LSM1-203ENST00000520755 G3V4G9 280 aa11.67□□□□□ -0.54
LSM1-203ENST00000520755 NDUFA4O00483 81 aa11.67□□□□□ -0.54
LSM1-203ENST00000520755 EDN2P20800 178 aa11.67□□□□□ -0.54
LSM1-203ENST00000520755 ATP6V0CP27449 155 aa11.67□□□□□ -0.54
LSM1-203ENST00000520755 RELQ04864 619 aaPredicted RBP11.67□□□□□ -0.54
LSM1-203ENST00000520755 GPHB5Q86YW7 130 aa11.67□□□□□ -0.54
LSM1-203ENST00000520755 STPG3Q8N7X2 389 aa11.67□□□□□ -0.54
LSM1-203ENST00000520755 BPIFCQ8NFQ6 507 aa11.67□□□□□ -0.54
LSM1-203ENST00000520755 ZNF471Q9BX82 626 aaPredicted RBP11.67□□□□□ -0.54
LSM1-203ENST00000520755 BORCS7-ASMTA0A0B4J1R7 106 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 JTBO76095 146 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 RD3LP0DJH9 198 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 USF2Q15853 346 aaPredicted RBP11.66□□□□□ -0.54
LSM1-203ENST00000520755 FAM106AQ4KMX7 169 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 REC114Q7Z4M0 266 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 OR9G4Q8NGQ1 327 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 STOML3Q8TAV4 291 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 PPP1R14BQ96C90 147 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 GINS3Q9BRX5 216 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 ELOVL1Q9BW60 279 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 PXMP4Q9Y6I8 212 aa11.66□□□□□ -0.54
LSM1-203ENST00000520755 A8MWP6 167 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 SAP30O75446 220 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 YIF1AO95070 293 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 IL4P05112 153 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 RPL29P47914 159 aaKnown RBP11.65□□□□□ -0.54
LSM1-203ENST00000520755 SELENOTP62341 195 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 C9orf66Q5T8R8 295 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 OR51G1Q8NGK1 321 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 RNF125Q96EQ8 232 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 PEMTQ9UBM1 199 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 TIMM9Q9Y5J7 89 aa11.65□□□□□ -0.54
LSM1-203ENST00000520755 TMEM213A2RRL7 107 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 LGALS9O00182 355 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 FABP1P07148 127 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 PLP1P60201 277 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 LYZP61626 148 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 B2MP61769 119 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 RAB31Q13636 194 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 GCSAMLQ5JQS6 135 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 SAMD5Q5TGI4 173 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 Q8WTZ3 238 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 PSMG3Q9BT73 122 aaPredicted RBP11.64□□□□□ -0.55
LSM1-203ENST00000520755 C20orf24Q9BUV8 137 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 GPR61Q9BZJ8 451 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 SLC39A9Q9NUM3 307 aa11.64□□□□□ -0.55
LSM1-203ENST00000520755 ZNF207O43670 478 aaKnown RBP11.63□□□□□ -0.55
LSM1-203ENST00000520755 SPP1P10451 314 aa11.63□□□□□ -0.55
LSM1-203ENST00000520755 PATE2Q6UY27 113 aa11.63□□□□□ -0.55
LSM1-203ENST00000520755 SLC51BQ86UW2 128 aa11.63□□□□□ -0.55
LSM1-203ENST00000520755 OR2G3Q8NGZ4 309 aa11.63□□□□□ -0.55
LSM1-203ENST00000520755 ST8SIA2Q92186 375 aa11.63□□□□□ -0.55
LSM1-203ENST00000520755 SLC25A32Q9H2D1 315 aa11.63□□□□□ -0.55
LSM1-203ENST00000520755 VSIRQ9H7M9 311 aa11.63□□□□□ -0.55
LSM1-203ENST00000520755 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
LSM1-203ENST00000520755 DOK5Q9P104 306 aa11.63□□□□□ -0.55
LSM1-203ENST00000520755 C17orf112F2Z3M2 114 aa11.62□□□□□ -0.55
LSM1-203ENST00000520755 CSN3P07498 182 aa11.62□□□□□ -0.55
LSM1-203ENST00000520755 TPT1P13693 172 aaKnown RBP11.62□□□□□ -0.55
LSM1-203ENST00000520755 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms