RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 PEF1Q9UBV8 284 aaKnown RBP6.93□□□□□ -1.3
CSMD1-208ENST00000520561 ZNF705EA8MWA4 302 aaPredicted RBP6.92□□□□□ -1.3
CSMD1-208ENST00000520561 PPP5D1E7EU14 171 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 BMPR1BO00238 502 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 RGS13O14921 159 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 GGCTO75223 188 aaKnown RBP6.92□□□□□ -1.3
CSMD1-208ENST00000520561 YIF1AO95070 293 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 CTSGP08311 255 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 PSG1P11464 419 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 S100A7P31151 101 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 ADMP35318 185 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 CDX1P47902 265 aaPredicted RBP6.92□□□□□ -1.3
CSMD1-208ENST00000520561 RAB2AP61019 212 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 KIAA0141Q14154 515 aaPredicted RBP6.92□□□□□ -1.3
CSMD1-208ENST00000520561 RPEL1Q2QD12 228 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 DPPA3Q6W0C5 159 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 S100A7AQ86SG5 101 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 C11orf44Q8N8P7 122 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 KLHL30-AS1Q8NEE0 82 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 OR1B1Q8NGR6 318 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 FAM213BQ8TBF2 198 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 WFDC12Q8WWY7 111 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 RNF125Q96EQ8 232 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 RNF2Q99496 336 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 CHRDL1Q9BU40 450 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 PBDC1Q9BVG4 233 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 TSSC4Q9Y5U2 329 aaPredicted RBP6.92□□□□□ -1.3
CSMD1-208ENST00000520561 PUS1Q9Y606 427 aaKnown RBP eCLIP6.92□□□□□ -1.3
CSMD1-208ENST00000520561 RFNGQ9Y644 331 aa6.92□□□□□ -1.3
CSMD1-208ENST00000520561 ELOA3CA0A087WX78 387 aaPredicted RBP6.91□□□□□ -1.3
CSMD1-208ENST00000520561 A0A1W2PPV4 95 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 HYPMO75409 117 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 OR2C1O95371 312 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 TRBV12-3P01733 135 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 HSPB1P04792 205 aaKnown RBP6.91□□□□□ -1.3
CSMD1-208ENST00000520561 IL4P05112 153 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 OR5G3P0C626 314 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 CD28P10747 220 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 ORM2P19652 201 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 ZP3P21754 424 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 CDC34P49427 236 aaPredicted RBP6.91□□□□□ -1.3
CSMD1-208ENST00000520561 PLP1P60201 277 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 RHOBP62745 196 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 TCTEX1D4Q5JR98 221 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 FAM122CQ6P4D5 195 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 OR10G4Q8NGN3 311 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 OR10G9Q8NGN4 311 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 OR10G7Q8NGN6 311 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 GATAD1Q8WUU5 269 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 DPF1Q92782 380 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 C19orf24Q9BVV8 132 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 ACTR3CQ9C0K3 210 aaPredicted RBP6.91□□□□□ -1.3
CSMD1-208ENST00000520561 VSIRQ9H7M9 311 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 SLC25A22Q9H936 323 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 HIGD1AQ9Y241 93 aa6.91□□□□□ -1.3
CSMD1-208ENST00000520561 MAST4O15021 2626 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 IGHV3-35A0A0C4DH35 117 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 CTXND1A0A1B0GTU2 59 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 A0A1W2PRX2 142 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 LINC01619G3V211 115 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 TEX46H3BTG2 121 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 NDUFA4O00483 81 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 TAS2R45P59539 299 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 BLOC1S1P78537 153 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 AWAT1Q58HT5 328 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 GCSAMLQ5JQS6 135 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 C10orf113Q5VZT2 155 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 SAT2Q96F10 170 aaPredicted RBP6.9□□□□□ -1.3
CSMD1-208ENST00000520561 RCC1LQ96I51 464 aaKnown RBP6.9□□□□□ -1.3
CSMD1-208ENST00000520561 NARS2Q96I59 477 aaKnown RBP6.9□□□□□ -1.3
CSMD1-208ENST00000520561 CITED2Q99967 270 aaPredicted RBP6.9□□□□□ -1.3
CSMD1-208ENST00000520561 MRPL32Q9BYC8 188 aaKnown RBP6.9□□□□□ -1.3
CSMD1-208ENST00000520561 RPRMQ9NS64 109 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 PFDN2Q9UHV9 154 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 RABAC1Q9UI14 185 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 RNF24Q9Y225 148 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 FUT9Q9Y231 359 aa6.9□□□□□ -1.3
CSMD1-208ENST00000520561 IGHV4OR15-8A0A075B7B6 117 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 A0A087WW49 117 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 WI2-2373I1.2A0A1W2PRP0 233 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 SEC14L6B5MCN3 397 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 I3L521 148 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 HBE1P02100 147 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 USF2Q15853 346 aaPredicted RBP6.89□□□□□ -1.31
CSMD1-208ENST00000520561 DEFB136Q30KP8 78 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 KRTAP24-1Q3LI83 254 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 FAM106AQ4KMX7 169 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 FAM78BQ5VT40 261 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 TOMM20LQ6UXN7 152 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 C18orf65Q6ZTR6 163 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 C8orf86Q6ZUL3 223 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 NDUFA11Q86Y39 141 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 TMEM190Q8WZ59 177 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 METTL26Q96S19 204 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 C20orf24Q9BUV8 137 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 DNAJC4Q9NNZ3 241 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 PLA2G2EQ9NZK7 142 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 MXRA5Q9NR99 2828 aa6.89□□□□□ -1.31
CSMD1-208ENST00000520561 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms