RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 PAIP2BQ9ULR5 123 aaKnown RBP13.64□□□□□ -0.23
HOXA3-203ENST00000518451 CXorf65A6NEN9 183 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 SNRPGP15A8MWD9 76 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 BUB3O43684 328 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 SYNGR2O43760 224 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 NDUFB6O95139 128 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 CA1P00915 261 aaPredicted RBP13.63□□□□□ -0.23
HOXA3-203ENST00000518451 IAPPP10997 89 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 CNPY1Q3B7I2 92 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 OR8G2PQ6IF36 304 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 FAM24BQ8N5W8 94 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 COQ8AQ8NI60 647 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 GLMPQ8WWB7 406 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 RNF125Q96EQ8 232 aa13.63□□□□□ -0.23
HOXA3-203ENST00000518451 SEPSECSQ9HD40 501 aaKnown RBP13.63□□□□□ -0.23
HOXA3-203ENST00000518451 C9orf170A2RU37 121 aa13.62□□□□□ -0.23
HOXA3-203ENST00000518451 NUPR2A6NF83 97 aa13.62□□□□□ -0.23
HOXA3-203ENST00000518451 IFNA21P01568 189 aa13.62□□□□□ -0.23
HOXA3-203ENST00000518451 ZNF688P0C7X2 276 aa13.62□□□□□ -0.23
HOXA3-203ENST00000518451 SNRPD3P62318 126 aaKnown RBP13.62□□□□□ -0.23
HOXA3-203ENST00000518451 GGNBP1Q5YKI7 109 aa13.62□□□□□ -0.23
HOXA3-203ENST00000518451 MORN3Q6PF18 240 aaPredicted RBP13.62□□□□□ -0.23
HOXA3-203ENST00000518451 PBDC1Q9BVG4 233 aa13.62□□□□□ -0.23
HOXA3-203ENST00000518451 CSMD3Q7Z407 3707 aa13.61□□□□□ -0.23
HOXA3-203ENST00000518451 WRBO00258 174 aa13.61□□□□□ -0.23
HOXA3-203ENST00000518451 CFDP00746 253 aaPredicted RBP13.61□□□□□ -0.23
HOXA3-203ENST00000518451 SPP1P10451 314 aa13.61□□□□□ -0.23
HOXA3-203ENST00000518451 SIGLEC15Q6ZMC9 328 aa13.61□□□□□ -0.23
HOXA3-203ENST00000518451 OR11H2Q8NH07 326 aa13.61□□□□□ -0.23
HOXA3-203ENST00000518451 MAGT1Q9H0U3 335 aa13.61□□□□□ -0.23
HOXA3-203ENST00000518451 NRN1Q9NPD7 142 aa13.61□□□□□ -0.23
HOXA3-203ENST00000518451 LINC00854A0A1B0GVQ3 168 aa13.6□□□□□ -0.23
HOXA3-203ENST00000518451 PMS2P11Q13670 270 aa13.6□□□□□ -0.23
HOXA3-203ENST00000518451 TRGV9Q99603 122 aa13.6□□□□□ -0.23
HOXA3-203ENST00000518451 FBXL17Q9UF56 701 aa13.6□□□□□ -0.23
HOXA3-203ENST00000518451 KLK5Q9Y337 293 aaPredicted RBP13.6□□□□□ -0.23
HOXA3-203ENST00000518451 OR4E1P0C645 316 aa13.59□□□□□ -0.23
HOXA3-203ENST00000518451 ZNF90Q03938 601 aa13.59□□□□□ -0.23
HOXA3-203ENST00000518451 C4orf46Q504U0 113 aa13.59□□□□□ -0.23
HOXA3-203ENST00000518451 PSMG4Q5JS54 123 aa13.59□□□□□ -0.23
HOXA3-203ENST00000518451 SPANXN5Q5MJ07 72 aa13.59□□□□□ -0.23
HOXA3-203ENST00000518451 C1orf194Q5T5A4 169 aa13.59□□□□□ -0.23
HOXA3-203ENST00000518451 TRPT1Q86TN4 253 aaKnown RBP13.59□□□□□ -0.23
HOXA3-203ENST00000518451 STRAPQ9Y3F4 350 aaKnown RBP13.59□□□□□ -0.23
HOXA3-203ENST00000518451 IGKV1D-37A0A075B6S9 117 aa13.58□□□□□ -0.24
HOXA3-203ENST00000518451 IL7P13232 177 aa13.58□□□□□ -0.24
HOXA3-203ENST00000518451 S100A7P31151 101 aa13.58□□□□□ -0.24
HOXA3-203ENST00000518451 NUTF2P61970 127 aaKnown RBP13.58□□□□□ -0.24
HOXA3-203ENST00000518451 ID3Q02535 119 aa13.58□□□□□ -0.24
HOXA3-203ENST00000518451 ACTL10Q5JWF8 245 aa13.58□□□□□ -0.24
HOXA3-203ENST00000518451 CEMP1Q6PRD7 247 aaPredicted RBP13.58□□□□□ -0.24
HOXA3-203ENST00000518451 RAB40CQ96S21 281 aa13.58□□□□□ -0.24
HOXA3-203ENST00000518451 MFFQ9GZY8 342 aa13.58□□□□□ -0.24
HOXA3-203ENST00000518451 KNCNA6PVL3 124 aa13.57□□□□□ -0.24
HOXA3-203ENST00000518451 ADAP1O75689 374 aa13.57□□□□□ -0.24
HOXA3-203ENST00000518451 ID1P41134 155 aa13.57□□□□□ -0.24
HOXA3-203ENST00000518451 NKX2-1P43699 371 aaPredicted RBP13.57□□□□□ -0.24
HOXA3-203ENST00000518451 LYZP61626 148 aa13.57□□□□□ -0.24
HOXA3-203ENST00000518451 EWSR1Q01844 656 aaKnown RBP eCLIP13.57□□□□□ -0.24
HOXA3-203ENST00000518451 THAP8Q8NA92 274 aa13.57□□□□□ -0.24
HOXA3-203ENST00000518451 PPP1R14BQ96C90 147 aa13.57□□□□□ -0.24
HOXA3-203ENST00000518451 SDHCQ99643 169 aaPredicted RBP13.57□□□□□ -0.24
HOXA3-203ENST00000518451 C11orf68Q9H3H3 251 aaKnown RBP13.57□□□□□ -0.24
HOXA3-203ENST00000518451 FLVCR2Q9UPI3 526 aa13.57□□□□□ -0.24
HOXA3-203ENST00000518451 DYNC2H1Q8NCM8 4307 aaKnown RBP13.56□□□□□ -0.24
HOXA3-203ENST00000518451 STARD9Q9P2P6 4700 aa13.56□□□□□ -0.24
HOXA3-203ENST00000518451 ANXA7P20073 488 aaKnown RBP13.55□□□□□ -0.24
HOXA3-203ENST00000518451 OR2F1Q13607 317 aa13.55□□□□□ -0.24
HOXA3-203ENST00000518451 SAMD13Q5VXD3 122 aa13.55□□□□□ -0.24
HOXA3-203ENST00000518451 OR8I2Q8N0Y5 310 aa13.55□□□□□ -0.24
HOXA3-203ENST00000518451 C11orf45Q8TAV5 145 aa13.55□□□□□ -0.24
HOXA3-203ENST00000518451 C1QTNF4Q9BXJ3 329 aa13.55□□□□□ -0.24
HOXA3-203ENST00000518451 PSENENQ9NZ42 101 aa13.55□□□□□ -0.24
HOXA3-203ENST00000518451 SLC45A2Q9UMX9 530 aa13.55□□□□□ -0.24
HOXA3-203ENST00000518451 POLR2GP62487 172 aaKnown RBP eCLIP13.54□□□□□ -0.24
HOXA3-203ENST00000518451 AKR1C1Q04828 323 aa13.54□□□□□ -0.24
HOXA3-203ENST00000518451 BPIFCQ8NFQ6 507 aa13.54□□□□□ -0.24
HOXA3-203ENST00000518451 SMIM8Q96KF7 97 aa13.54□□□□□ -0.24
HOXA3-203ENST00000518451 IGKV1OR2-108A0A075B7D4 117 aa13.53□□□□□ -0.24
HOXA3-203ENST00000518451 PRSS46E5RG02 174 aa13.53□□□□□ -0.24
HOXA3-203ENST00000518451 MIFP14174 115 aa13.53□□□□□ -0.24
HOXA3-203ENST00000518451 BTCP35070 178 aa13.53□□□□□ -0.24
HOXA3-203ENST00000518451 OR4D5Q8NGN0 318 aa13.53□□□□□ -0.24
HOXA3-203ENST00000518451 PHLDA1Q8WV24 401 aaPredicted RBP13.53□□□□□ -0.24
HOXA3-203ENST00000518451 MITD1Q8WV92 249 aa13.53□□□□□ -0.24
HOXA3-203ENST00000518451 RYR2Q92736 4967 aa13.52□□□□□ -0.24
HOXA3-203ENST00000518451 H3BP45 60 aa13.52□□□□□ -0.25
HOXA3-203ENST00000518451 GIG44P09565 113 aaPredicted RBP13.52□□□□□ -0.25
HOXA3-203ENST00000518451 IAH1Q2TAA2 248 aaPredicted RBP13.52□□□□□ -0.25
HOXA3-203ENST00000518451 TMEM144Q7Z5S9 345 aa13.52□□□□□ -0.25
HOXA3-203ENST00000518451 H3BMM0 161 aa13.51□□□□□ -0.25
HOXA3-203ENST00000518451 LYRM1O43325 122 aa13.51□□□□□ -0.25
HOXA3-203ENST00000518451 SSSCA1O60232 199 aa13.51□□□□□ -0.25
HOXA3-203ENST00000518451 GALR1P47211 349 aa13.51□□□□□ -0.25
HOXA3-203ENST00000518451 PSMB3P49720 205 aa13.51□□□□□ -0.25
HOXA3-203ENST00000518451 MEOX2P50222 304 aa13.51□□□□□ -0.25
HOXA3-203ENST00000518451 TAS2R30P59541 319 aa13.51□□□□□ -0.25
HOXA3-203ENST00000518451 LINC00299Q6ZSB3 139 aa13.51□□□□□ -0.25
HOXA3-203ENST00000518451 ACOT7LQ6ZUV0 252 aa13.51□□□□□ -0.25
HOXA3-203ENST00000518451 S100A7AQ86SG5 101 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms