RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 VBP1P61758 197 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SNRPD3P62318 126 aaKnown RBP-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ELP6Q0PNE2 266 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SCGB2A2Q13296 93 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 LCN8Q6JVE9 175 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 FAM183BPQ6ZVS7 135 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 UBE2J2Q8N2K1 259 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SIGLECL1Q8N7X8 197 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GRPEL2Q8TAA5 225 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 PPP1R1CQ8WVI7 109 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 FBXO32Q969P5 355 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CCL13Q99616 98 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 RAB1BQ9H0U4 201 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 BCL2L10Q9HD36 194 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TREM1Q9NP99 234 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MID1IP1Q9NPA3 183 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CMTM6Q9NX76 183 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 NAT8BQ9UHF3 227 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 XIRP1Q702N8 1843 aaKnown RBP-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 DNMT1P26358 1616 aaKnown RBP-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 FREM2Q5SZK8 3169 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 DCCP43146 1447 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 KIAA1549LQ6ZVL6 1849 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ATP8B3O60423 1300 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TRAV8-1A0A0A6YYK1 113 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SERTM2A0A1B0GWG4 89 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 C7orf71A4D174 169 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 H7C2Y5 167 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 COX7A2LO14548 114 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 PTBP3O95758 552 aaKnown RBP-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GP1BAP07359 652 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 S100A3P33764 101 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 KRT20P35900 424 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 DEFA3P59666 94 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CDK6Q00534 326 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TOMM20Q15388 145 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GRK1Q15835 563 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SPANXN3Q5MJ09 141 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ATP5L2Q7Z4Y8 100 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 DEFB123Q8N688 67 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR7G2Q8NG99 324 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR51A2Q8NGJ7 313 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR2Y1Q8NGV0 311 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TERB2Q8NHR7 220 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 RAB37Q96AX2 223 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 LRRC45Q96CN5 670 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GNPNAT1Q96EK6 184 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 PACRGQ96M98 296 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 IFT46Q9NQC8 304 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 BET1LQ9NYM9 111 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 IL19Q9UHD0 177 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 PXMP4Q9Y6I8 212 aa-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SPTBN5Q9NRC6 3674 aaKnown RBP-2.07□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ROBO3Q96MS0 1386 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TRAV27A0A087WT01 109 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ANKRD20A5PA0PJZ0 165 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR4C46A6NHA9 309 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 B4DSR2 109 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 LRRN3E7EW58 273 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 M0R036 132 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GATCO43716 136 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SNAP29O95721 258 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SRP19P09132 144 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 COX4I1P13073 169 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ACYP2P14621 99 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TAS2R41P59536 307 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 YWHAEP62258 255 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CCL20P78556 96 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MIR22HGQ0VDD5 57 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MRPL23Q16540 153 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 C2orf76Q3KRA6 126 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ACTL10Q5JWF8 245 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 C1orf134Q5TEV5 83 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 RNASEKQ6P5S7 137 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TMEM107Q6UX40 140 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 C3orf62Q6ZUJ4 267 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 NANOGNBQ7Z5D8 188 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ARPINQ7Z6K5 226 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SCD5Q86SK9 330 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR10D3Q8NH80 312 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MCFD2Q8NI22 146 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TMEM141Q96I45 108 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 DERL1Q9BUN8 251 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 DEFB129Q9H1M3 183 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TAF9BQ9HBM6 251 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 DMAC2Q9NW81 257 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 RABL2AQ9UBK7 228 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 LY96Q9Y6Y9 160 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 DOCK1Q14185 1865 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ARHGEF11O15085 1522 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GOLGA3Q08378 1498 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CSMD2Q7Z408 3487 aa-2.08□□□□□ -2.74
RNU6-1238P-201ENST00000517215 KANK1Q14678 1352 aa-2.09□□□□□ -2.74
RNU6-1238P-201ENST00000517215 RAB3GAP2Q9H2M9 1393 aa-2.09□□□□□ -2.74
RNU6-1238P-201ENST00000517215 PAPPAQ13219 1627 aa-2.09□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MGAT4DA6NG13 374 aa-2.09□□□□□ -2.74
RNU6-1238P-201ENST00000517215 K7EQM0 130 aa-2.09□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SNNO75324 88 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TRAPPC6AO75865 159 aa-2.09□□□□□ -2.74
RNU6-1238P-201ENST00000517215 IFNGP01579 166 aa-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms