RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 TMEM189A5PLL7 270 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 IFNA10P01566 189 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 C12orf74Q32Q52 190 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 OR51G1Q8NGK1 321 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 OR4C16Q8NGL9 310 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 TMEM170AQ8WVE7 144 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 RNF125Q96EQ8 232 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 NEU1Q99519 415 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 NDUFAF3Q9BU61 184 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 MIXL1Q9H2W2 232 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 GPR132Q9UNW8 380 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 KCNIP3Q9Y2W7 256 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 U3KQ87 197 aa10.51□□□□□ -0.73
SCARNA20.5-201ENST00000516991 TEX48A0A1B0GUV7 120 aa10.5□□□□□ -0.73
SCARNA20.5-201ENST00000516991 CTDSPLO15194 276 aa10.5□□□□□ -0.73
SCARNA20.5-201ENST00000516991 NXPH3O95157 252 aa10.5□□□□□ -0.73
SCARNA20.5-201ENST00000516991 PSG1P11464 419 aa10.5□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ATP5IP56385 69 aaPredicted RBP10.5□□□□□ -0.73
SCARNA20.5-201ENST00000516991 PIGBOS1A0A0B4J2F0 54 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 FABP1P07148 127 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SMIM18P0DKX4 95 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ID1P41134 155 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 CCR6P51684 374 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 KLF9Q13886 244 aaPredicted RBP10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SMCO1Q147U7 214 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ZNF705AQ6ZN79 300 aaPredicted RBP10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 LGI3Q8N145 548 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 POM121L12Q8N7R1 296 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 DTD1Q8TEA8 209 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 CLUHP3Q96NS8 147 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SCGB3A2Q96PL1 93 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 HSPB7Q9UBY9 170 aa10.49□□□□□ -0.73
SCARNA20.5-201ENST00000516991 A0A0B4J2A0 478 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ZNF705FA8MVS1 300 aaPredicted RBP10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ZNF705DP0CH99 300 aaPredicted RBP10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ZNF705BP0CI00 300 aaPredicted RBP10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SPART-AS1P0CW21 52 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 PSMB3P49720 205 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SRPXP78539 464 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 C1orf194Q5T5A4 169 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SAMD13Q5VXD3 122 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SPATA31B1PQ5VZV4 182 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 FOXI2Q6ZQN5 318 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ZNF767PQ75MW2 155 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 CLVS1Q8IUQ0 354 aaPredicted RBP10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 OR51S1Q8NGJ8 323 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SLC35E1Q96K37 410 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 FAM210BQ96KR6 192 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 PBDC1Q9BVG4 233 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SHPKQ9UHJ6 478 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SCP2D1Q9UJQ7 156 aa10.48□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ANKRD20A5PA0PJZ0 165 aa10.47□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ZFP92A6NM28 416 aa10.47□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ANXA3P12429 323 aa10.47□□□□□ -0.73
SCARNA20.5-201ENST00000516991 GPX4P36969 197 aaPredicted RBP10.47□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SUPT4H1P63272 117 aaKnown RBP10.47□□□□□ -0.73
SCARNA20.5-201ENST00000516991 IL18Q14116 193 aa10.47□□□□□ -0.73
SCARNA20.5-201ENST00000516991 COQ8AQ8NI60 647 aa10.47□□□□□ -0.73
SCARNA20.5-201ENST00000516991 SAV1Q9H4B6 383 aaPredicted RBP10.47□□□□□ -0.73
SCARNA20.5-201ENST00000516991 RFNGQ9Y644 331 aa10.47□□□□□ -0.73
SCARNA20.5-201ENST00000516991 CTDSP2O14595 271 aa10.46□□□□□ -0.73
SCARNA20.5-201ENST00000516991 GPR141Q7Z602 305 aa10.46□□□□□ -0.73
SCARNA20.5-201ENST00000516991 DIRAS2Q96HU8 199 aa10.46□□□□□ -0.73
SCARNA20.5-201ENST00000516991 RBKSQ9H477 322 aa10.46□□□□□ -0.73
SCARNA20.5-201ENST00000516991 CCDC59Q9P031 241 aaKnown RBP10.46□□□□□ -0.73
SCARNA20.5-201ENST00000516991 ISLRO14498 428 aa10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 AKR1C4P17516 323 aa10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 LYZP61626 148 aa10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 GAMTQ14353 236 aa10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 OR1S1Q8NH92 325 aa10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 PPP1R14BQ96C90 147 aa10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 LINC00052Q96N35 136 aa10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 MRPS26Q9BYN8 205 aaKnown RBP10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 RSL24D1Q9UHA3 163 aaKnown RBP10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
SCARNA20.5-201ENST00000516991 IGHV3OR16-12A0A075B7B8 117 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 A0A1B0GVY2 172 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 DUXBA0A1W2PPF3 345 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 SOCS3O14543 225 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 IGKV3-20P01619 116 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 MEOX2P50222 304 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 EMP1P54849 157 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 PAX9P55771 341 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 RAB11AP62491 216 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 SPCS2Q15005 226 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 ZNF79Q15937 498 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 LGALS9BQ3B8N2 356 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 GDF5OSQ5U4N7 250 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 EBLN2Q6P2I7 272 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 LYZL2Q7Z4W2 148 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 UBE2DNLQ8IWF7 75 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 NIPSNAP3BQ9BS92 247 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 WDR12Q9GZL7 423 aaKnown RBP10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 PRR13Q9NZ81 148 aa10.44□□□□□ -0.74
SCARNA20.5-201ENST00000516991 IGKV1D-37A0A075B6S9 117 aa10.43□□□□□ -0.74
SCARNA20.5-201ENST00000516991 PRSS29PA6NIE9 313 aa10.43□□□□□ -0.74
SCARNA20.5-201ENST00000516991 SNRPGP15A8MWD9 76 aa10.43□□□□□ -0.74
SCARNA20.5-201ENST00000516991 CFDP00746 253 aaPredicted RBP10.43□□□□□ -0.74
SCARNA20.5-201ENST00000516991 IFNA21P01568 189 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms