RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 A0A0D9SG52 128 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 H0YIZ8 118 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 SMLR1H3BR10 107 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 DNASE2O00115 360 aaPredicted RBP4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 AGPAT2O15120 278 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ZNF207O43670 478 aaKnown RBP4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 COX7A2P2O60397 106 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 HYPMO75409 117 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 CD5P06127 495 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 HNRNPCP07910 306 aaKnown RBP eCLIP4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 LINC00869P0C866 280 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGLC1P0CG04 106 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 PSG1P11464 419 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 LYL1P12980 280 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 FOLR2P14207 255 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ADMP35318 185 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 FHL3Q13643 280 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 GUCA2BQ16661 112 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 PXDC1Q5TGL8 231 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 LCN12Q6JVE5 192 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TOMM20LQ6UXN7 152 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TCTE3Q8IZS6 198 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 THAP8Q8NA92 274 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 OR1B1Q8NGR6 318 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TMEM170AQ8WVE7 144 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TMEM190Q8WZ59 177 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 RNF125Q96EQ8 232 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 HYLS1Q96M11 299 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 AQP10Q96PS8 301 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 PFDN5Q99471 154 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ARL6Q9H0F7 186 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TECRQ9NZ01 308 aaKnown RBP4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 FBXL17Q9UF56 701 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TNFSF18Q9UNG2 199 aa4.18□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGHV3OR16-8A0A075B7F1 116 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ELOA3CA0A087WX78 387 aaPredicted RBP4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGHV3-49A0A0A0MS15 119 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGHV7-4-1A0A0J9YVY3 117 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 HELTA6NFD8 242 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 C2orf70A6NJV1 201 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 PMS2P5A8MQ11 134 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 HMSDA8MTL9 139 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 PLXNB1O43157 2135 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 JTBO76095 146 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGKV1-17P01599 117 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 C1QBP02746 253 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGLL1P15814 213 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 CBLN1P23435 193 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 CMC4P56277 68 aaPredicted RBP4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ZNF90Q03938 601 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ARL16Q0P5N6 197 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ACOT6Q3I5F7 207 aaPredicted RBP4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TM4SF20Q53R12 229 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 C10orf113Q5VZT2 155 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 EIF5AL1Q6IS14 154 aaKnown RBP4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 OR8I2Q8N0Y5 310 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 WFDC9Q8NEX5 89 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 OR2K2Q8NGT1 345 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 LRRC20Q8TCA0 184 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 CHAC2Q8WUX2 184 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 GNPNAT1Q96EK6 184 aaPredicted RBP4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 RNF2Q99496 336 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ARPC5LQ9BPX5 153 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 RHPN1-AS1Q9BWJ2 59 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 C11orf1Q9H5F2 150 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 SLC25A22Q9H936 323 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 MRPL36Q9P0J6 103 aaKnown RBP4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 DOK5Q9P104 306 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 SMPXQ9UHP9 88 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 HIGD1AQ9Y241 93 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 WDR83OSQ9Y284 106 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 PXMP4Q9Y6I8 212 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 STAB1Q9NY15 2570 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TNCP24821 2201 aa4.17□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGKV3-7A0A075B6H7 116 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGHV3OR16-13A0A075B7E8 117 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 IGHV3-74A0A0B4J1X5 117 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TRAV25A0A0B4J276 109 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 A0A1W2PPV4 95 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 WI2-2373I1.2A0A1W2PRP0 233 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 OR4C46A6NHA9 309 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ZNF785A8K8V0 405 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 A8MWP6 167 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 PRSS46E5RG02 174 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 F8W735 103 aaPredicted RBP4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 MBP02144 154 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 CSN3P07498 182 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ATF4P18848 351 aaPredicted RBP4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 GATA2P23769 480 aaPredicted RBP4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 GALR1P47211 349 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 RPL29P47914 159 aaKnown RBP4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 B2MP61769 119 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 ZNF345Q14585 488 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 VWC2Q2TAL6 325 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 Q5BKY6 102 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 FFAR4Q5NUL3 377 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 UNQ9165/PRO28630Q6UXU0 137 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 TCF24Q7RTU0 167 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 GTSCR1Q86UQ5 136 aa4.16□□□□□ -1.74
SCARNA16.4-201ENST00000516956 HAPLN4Q86UW8 402 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms