RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 PSG1P11464 419 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 NKX2-1P43699 371 aaPredicted RBP4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 TAS2R30P59541 319 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 NUTF2P61970 127 aaKnown RBP4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 DEFB135Q30KP9 77 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 TIGITQ495A1 244 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 GGNBP1Q5YKI7 109 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 C16orf54Q6UWD8 224 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 SIGLEC15Q6ZMC9 328 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 STHQ8IWL8 128 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 STXBP6Q8NFX7 210 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 OR4D5Q8NGN0 318 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 MITD1Q8WV92 249 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 NPIPB3Q92617 1050 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 ACY3Q96HD9 319 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 GPR82Q96P67 336 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 RAB40CQ96S21 281 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 SDHCQ99643 169 aaPredicted RBP4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 C1QTNF4Q9BXJ3 329 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 WDR12Q9GZL7 423 aaKnown RBP4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 MFFQ9GZY8 342 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 CSTL1Q9H114 145 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 RETNQ9HD89 108 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 PRR13Q9NZ81 148 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 UBQLN2Q9UHD9 624 aa4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 STRAPQ9Y3F4 350 aaKnown RBP4.43□□□□□ -1.7
SCARNA18.1-201ENST00000516330 STARD9Q9P2P6 4700 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 IGHV3-49A0A0A0MS15 119 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 LCE6AA0A183 80 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 SNRPGP15A8MWD9 76 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 K7EPK0 472 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 NXPH3O95157 252 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 APOHP02749 345 aaPredicted RBP4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 HOXB5P09067 269 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 PSMB3P49720 205 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 DEFB131AP59861 70 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 SELENOTP62341 195 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 RPL11P62913 178 aaKnown RBP4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 ID3Q02535 119 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 GAMTQ14353 236 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 C4orf46Q504U0 113 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 SPATA31B1PQ5VZV4 182 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 ACOT7LQ6ZUV0 252 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 TMEM144Q7Z5S9 345 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 TRPT1Q86TN4 253 aaKnown RBP4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 BPIFCQ8NFQ6 507 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 CLUHP3Q96NS8 147 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 GGACTQ9BVM4 153 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 PTTG2Q9NZH5 202 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 CSMD3Q7Z407 3707 aa4.42□□□□□ -1.7
SCARNA18.1-201ENST00000516330 IGKV3-7A0A075B6H7 116 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 IGKV1D-37A0A075B6S9 117 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 IGHV3OR16-13A0A075B7E8 117 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 IGHV3-74A0A0B4J1X5 117 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 ZNF705EA8MWA4 302 aaPredicted RBP4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 ISLRO14498 428 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 CA1P00915 261 aaPredicted RBP4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 ZNF688P0C7X2 276 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 IAPPP10997 89 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 HLA-DRB4P13762 266 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 MIFP14174 115 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 TFPI2P48307 235 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 TCTAP57738 103 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 LYZP61626 148 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 DLK1P80370 383 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 AKR1C1Q04828 323 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 ZNF846Q147U1 533 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 IAH1Q2TAA2 248 aaPredicted RBP4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 PXDC1Q5TGL8 231 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 TMEM14EPQ6UXP3 125 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 APRG1Q8IVJ8 170 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 GBGT1Q8N5D6 347 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 PBDC1Q9BVG4 233 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 HRH4Q9H3N8 390 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 NUDT15Q9NV35 164 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 MGAT4CQ9UBM8 478 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 HLA-DRB4X5D2U9 266 aa4.41□□□□□ -1.7
SCARNA18.1-201ENST00000516330 RYR3Q15413 4870 aa4.4□□□□□ -1.7
SCARNA18.1-201ENST00000516330 IGKV1OR2-108A0A075B7D4 117 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 IGHV3-66A0A0C4DH42 116 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 A0A0J9YWU9 116 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 TEX48A0A1B0GUV7 120 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 H3BP45 60 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 SSSCA1O60232 199 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 PRAF2O60831 178 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 ADAP1O75689 374 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 TCRBP04435 133 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 RPL35AP18077 110 aaKnown RBP4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 CXCL2P19875 107 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 ANXA7P20073 488 aaKnown RBP4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 PVALBP20472 110 aaPredicted RBP4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 ID1P41134 155 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 GALR1P47211 349 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 PAX9P55771 341 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 PLP1P60201 277 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 RAP2BP61225 183 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 POLR2GP62487 172 aaKnown RBP eCLIP4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 ASAH1Q13510 395 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 MLANAQ16655 118 aa4.4□□□□□ -1.71
SCARNA18.1-201ENST00000516330 SPANXN5Q5MJ07 72 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms