RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 SPG11Q96JI7 2443 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 TRAV40A0A0B4J280 105 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 RPL23P62829 140 aaKnown RBP12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 ADIRFQ15847 76 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 C9orf152Q5JTZ5 239 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 FANCD2OSQ96PS1 177 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 RASL11BQ9BPW5 248 aa12.19□□□□□ -0.46
THUMPD3-210ENST00000515662 FBN2P35556 2912 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 SCO2A0A1W2PP80 73 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 CXorf65A6NEN9 183 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 OR10J4P0C629 311 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 SLC25A16P16260 332 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 ORM2P19652 201 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 S100PP25815 95 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 BRD3OSQ6XYD6 125 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 OR5AU1Q8NGC0 362 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 DERL1Q9BUN8 251 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 SVEP1Q4LDE5 3571 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 FAM208BQ5VWN6 2430 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 IGLV11-55A0A075B6I3 123 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 B4DSR2 109 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 LINC00305Q7Z4B0 112 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 OR1B1Q8NGR6 318 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 RBM14Q96PK6 669 aaKnown RBP12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 HSPB9Q9BQS6 159 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 TMEM242Q9NWH2 141 aa12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 GAR1Q9NY12 217 aaKnown RBP12.18□□□□□ -0.46
THUMPD3-210ENST00000515662 IGHV4-38-2P0DP08 117 aa12.17□□□□□ -0.46
THUMPD3-210ENST00000515662 COL8A1P27658 744 aa12.17□□□□□ -0.46
THUMPD3-210ENST00000515662 PLP1P60201 277 aa12.17□□□□□ -0.46
THUMPD3-210ENST00000515662 CELSR2Q9HCU4 2923 aa12.17□□□□□ -0.46
THUMPD3-210ENST00000515662 HYPMO75409 117 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 IGKV1-17P01599 117 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 S100A2P29034 98 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 TIGITQ495A1 244 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 C11orf52Q96A22 123 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 A0A0U1RQK1 487 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 CLDN34H7C241 214 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 PSG1P11464 419 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 KRTAP10-9P60411 292 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 HIST3H2BBQ8N257 126 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 HIF1ANQ9NWT6 349 aa12.16□□□□□ -0.46
THUMPD3-210ENST00000515662 PYYP10082 97 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 FABP4P15090 132 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 OR5T1Q8NG75 326 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 PIFOQ8TCI5 191 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 PAXXQ9BUH6 204 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 CTDSP1Q9GZU7 261 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 MEGF9Q9H1U4 602 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 A0A096LNT2 108 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 A0A1W2PRE2 83 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 PPP1R2P9O14990 202 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 ELOVL1Q9BW60 279 aa12.15□□□□□ -0.46
THUMPD3-210ENST00000515662 GGTLC3B5MD39 225 aa12.14□□□□□ -0.47
THUMPD3-210ENST00000515662 PHOX2AO14813 284 aa12.14□□□□□ -0.47
THUMPD3-210ENST00000515662 C16orf82Q7Z2V1 217 aa12.14□□□□□ -0.47
THUMPD3-210ENST00000515662 LINC01551Q86U37 167 aa12.14□□□□□ -0.47
THUMPD3-210ENST00000515662 C5orf56Q8N8D9 126 aa12.14□□□□□ -0.47
THUMPD3-210ENST00000515662 SGMS2Q8NHU3 365 aa12.14□□□□□ -0.47
THUMPD3-210ENST00000515662 TRBV20OR9-2A0A075B6H5 130 aa12.14□□□□□ -0.47
THUMPD3-210ENST00000515662 FXYD5Q96DB9 178 aa12.14□□□□□ -0.47
THUMPD3-210ENST00000515662 TMEM219Q86XT9 240 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 STXBP6Q8NFX7 210 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 ZNF48Q96MX3 618 aaPredicted RBP12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 SOX21Q9Y651 276 aaPredicted RBP12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 S4R3C0 116 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 ATP6V0E1O15342 81 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 NDUFB8O95169 186 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 GATA3P23771 443 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 MFAP4P55083 255 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 LYZP61626 148 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 AURKAIP1Q9NWT8 199 aaPredicted RBP12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 THYN1Q9P016 225 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 HIGD1AQ9Y241 93 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
THUMPD3-210ENST00000515662 SH2D7A6NKC9 451 aaPredicted RBP12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 AVPP01185 164 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 SUMO1P63165 101 aaKnown RBP12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 LINC01356Q8N9X3 169 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 TMUB1Q9BVT8 246 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 TRAV30A0A087WSZ9 112 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 PGPEP1LA6NFU8 196 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 LINC01548A6NM66 108 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 F8W735 103 aaPredicted RBP12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 OR2J3O76001 311 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 TOMM40O96008 361 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 CRYBB3P26998 211 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 UNQ5815/PRO19632Q6UWF5 114 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 C21orf62Q9NYP8 219 aa12.12□□□□□ -0.47
THUMPD3-210ENST00000515662 MAP1AP78559 2803 aaPredicted RBP12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 GNG7O60262 68 aa12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 ECSCRQ19T08 205 aa12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 PRDM13Q9H4Q3 707 aa12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 BEX4Q9NWD9 120 aaPredicted RBP12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 MRPL27Q9P0M9 148 aaKnown RBP12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 CSMD1Q96PZ7 3565 aa12.11□□□□□ -0.47
THUMPD3-210ENST00000515662 CENPEQ02224 2701 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms