RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, human

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-222	ENST00000515609	IGLV1-40	P01703	118 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	IGHV3-48	P01763	117 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	ARL14EPL	P0DKL9	152 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	CD99	P14209	185 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	PPIF	P30405	207 aa	Known RBP	7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	BMI1	P35226	326 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	LYZ	P61626	148 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	BLCAP	P62952	87 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	MEF2B	Q02080	365 aa	Predicted RBP	7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	FOXE3	Q13461	319 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	ZNF726P1	Q15940	193 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	HAGH	Q16775	308 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	SOHLH1	Q5JUK2	328 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	LINC00305	Q7Z4B0	112 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609		Q8N2B8	174 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	RPUSD4	Q96CM3	377 aa	Known RBP	7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	RNF125	Q96EQ8	232 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	GPR82	Q96P67	336 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	SEPSECS	Q9HD40	501 aa	Known RBP	7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	RFNG	Q9Y644	331 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	UNC79	Q9P2D8	2635 aa		7.42	□□□□□ -1.22
TPM3-222	ENST00000515609	IGHV3-21	A0A0B4J1V1	117 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	LOC102723971	A0A1B0GUV8	181 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609		A0A1B0GV50	99 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	PSMB11	A5LHX3	300 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	TGOLN2	O43493	480 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	SNAPIN	O95295	136 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	IL4	P05112	153 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	CLEC3B	P05452	202 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	SFTA3	P0C7M3	94 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	GCHFR	P30047	84 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	MEOX2	P50222	304 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	FGF8	P55075	233 aa	Predicted RBP	7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	KRTAP1-1	Q07627	177 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	TIGIT	Q495A1	244 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	BPIFA4P	Q86YQ2	179 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	WFDC12	Q8WWY7	111 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	MS4A10	Q96PG2	267 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	OR51M1	Q9H341	326 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	TMEM14C	Q9P0S9	112 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	RABAC1	Q9UI14	185 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	PRELID1	Q9Y255	219 aa		7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	SOX21	Q9Y651	276 aa	Predicted RBP	7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	GCN1	Q92616	2671 aa	Known RBP	7.41	□□□□□ -1.22
TPM3-222	ENST00000515609	ABCA1	O95477	2261 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609		A0A1W2PRE2	83 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	WI2-2373I1.2	A0A1W2PRP0	233 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	OR2T8	A6NH00	312 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	CTSG	P08311	255 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	RPL7	P18124	248 aa	Known RBP	7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	GPR183	P32249	361 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	UBE2L3	P68036	154 aa	Known RBP	7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	GCSAML	Q5JQS6	135 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	C1orf194	Q5T5A4	169 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	CST9LP1	Q5W188	147 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	C19orf35	Q6ZS72	473 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	CCDC28A	Q8IWP9	274 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	ZNF491	Q8N8L2	437 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	OR4F17	Q8NGA8	305 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	OR5AU1	Q8NGC0	362 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	OR4F5	Q8NH21	305 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	TMEM37	Q8WXS4	190 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	GRAMD2B	Q96HH9	432 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	OR4F4	Q96R69	305 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	NIPSNAP3B	Q9BS92	247 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	PAXX	Q9BUH6	204 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	GNB4	Q9HAV0	340 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	MRPL36	Q9P0J6	103 aa	Known RBP	7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	MRPL27	Q9P0M9	148 aa	Known RBP	7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	DOK5	Q9P104	306 aa		7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	CARHSP1	Q9Y2V2	147 aa	Known RBP	7.4	□□□□□ -1.22
TPM3-222	ENST00000515609	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	7.39	□□□□□ -1.23
TPM3-222	ENST00000515609		A0A1W2PS18	150 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	DNAJC9-AS1	A6NH13	148 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	SH2D7	A6NKC9	451 aa	Predicted RBP	7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	LINC01548	A6NM66	108 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	C11orf94	C9JXX5	98 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	PAGE4	O60829	102 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	GGCT	O75223	188 aa	Known RBP	7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	APOC3	P02656	99 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	RNASE1	P07998	156 aa	Known RBP	7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	GATA2	P23769	480 aa	Predicted RBP	7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	PSMB8	P28062	276 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	ARL3	P36405	182 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	CCL20	P78556	96 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	CFHR3	Q02985	330 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	PNRC1	Q12796	327 aa	Predicted RBP	7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	ICAM4	Q14773	271 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	FAM106A	Q4KMX7	169 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	ZNF343	Q6P1L6	599 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	CLEC19A	Q6UXS0	136 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	MIR17HG	Q75NE6	70 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	LYPD1	Q8N2G4	141 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	OR4X2	Q8NGF9	303 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	RXFP4	Q8TDU9	374 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	UBE2E2	Q96LR5	201 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	NOL4L	Q96MY1	436 aa	Predicted RBP	7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	METTL26	Q96S19	204 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	SHANK2-AS3	Q9BTD1	123 aa		7.39	□□□□□ -1.23
TPM3-222	ENST00000515609	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.39	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms