RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 ZIK1Q3SY52 487 aaPredicted RBP8.5□□□□□ -1.05
SMAD1-216ENST00000515527 HES5Q5TA89 166 aa8.5□□□□□ -1.05
SMAD1-216ENST00000515527 WDR73Q6P4I2 378 aa8.5□□□□□ -1.05
SMAD1-216ENST00000515527 Q6ZS49 121 aa8.5□□□□□ -1.05
SMAD1-216ENST00000515527 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
SMAD1-216ENST00000515527 PPP1R14DQ9NXH3 145 aa8.5□□□□□ -1.05
SMAD1-216ENST00000515527 PRO0255Q9UI72 69 aa8.5□□□□□ -1.05
SMAD1-216ENST00000515527 G6PCP35575 357 aa8.49□□□□□ -1.05
SMAD1-216ENST00000515527 SNCAP37840 140 aa8.49□□□□□ -1.05
SMAD1-216ENST00000515527 OPRK1P41145 380 aa8.49□□□□□ -1.05
SMAD1-216ENST00000515527 FLOT2Q14254 428 aa8.49□□□□□ -1.05
SMAD1-216ENST00000515527 MLANAQ16655 118 aa8.49□□□□□ -1.05
SMAD1-216ENST00000515527 SPATA24Q86W54 205 aa8.49□□□□□ -1.05
SMAD1-216ENST00000515527 Q8N976 141 aa8.49□□□□□ -1.05
SMAD1-216ENST00000515527 SLC7A6OSQ96CW6 309 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-216ENST00000515527 H7BYZ3 331 aa8.48□□□□□ -1.05
SMAD1-216ENST00000515527 GATA2P23769 480 aaPredicted RBP8.48□□□□□ -1.05
SMAD1-216ENST00000515527 RHOBP62745 196 aa8.48□□□□□ -1.05
SMAD1-216ENST00000515527 LINC01556Q5JQF7 62 aa8.48□□□□□ -1.05
SMAD1-216ENST00000515527 AADACL3Q5VUY0 350 aa8.48□□□□□ -1.05
SMAD1-216ENST00000515527 OR6F1Q8NGZ6 308 aa8.48□□□□□ -1.05
SMAD1-216ENST00000515527 GABARAPL1Q9H0R8 117 aa8.48□□□□□ -1.05
SMAD1-216ENST00000515527 CORTO00230 105 aa8.47□□□□□ -1.05
SMAD1-216ENST00000515527 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
SMAD1-216ENST00000515527 NUP62P37198 522 aaPredicted RBP8.47□□□□□ -1.05
SMAD1-216ENST00000515527 THAP8Q8NA92 274 aa8.47□□□□□ -1.05
SMAD1-216ENST00000515527 ZBTB34Q8NCN2 500 aa8.47□□□□□ -1.05
SMAD1-216ENST00000515527 OR1S2Q8NGQ3 325 aa8.47□□□□□ -1.05
SMAD1-216ENST00000515527 C8orf49Q96NF6 230 aa8.47□□□□□ -1.05
SMAD1-216ENST00000515527 TSC22D3Q99576 134 aa8.47□□□□□ -1.05
SMAD1-216ENST00000515527 PLGRKTQ9HBL7 147 aa8.47□□□□□ -1.05
SMAD1-216ENST00000515527 FUT9Q9Y231 359 aa8.47□□□□□ -1.05
SMAD1-216ENST00000515527 IGHV3-30P01768 117 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 IGHV3-33P01772 117 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 IGHV3-30-3P0DP02 117 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 IGHV3-30-5P0DP03 117 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 CRYBA4P53673 196 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 MSMO1Q15800 293 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 SPINK9Q5DT21 86 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 SAMD13Q5VXD3 122 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 REG3GQ6UW15 175 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 SPARTQ8N0X7 666 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 TSPAN14Q8NG11 270 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 PFDN2Q9UHV9 154 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 HHLA3Q9XRX5 114 aa8.46□□□□□ -1.06
SMAD1-216ENST00000515527 E5RGE8 158 aa8.45□□□□□ -1.06
SMAD1-216ENST00000515527 K7EQD1 137 aa8.45□□□□□ -1.06
SMAD1-216ENST00000515527 IGLC1P0CG04 106 aa8.45□□□□□ -1.06
SMAD1-216ENST00000515527 GADD45AP24522 165 aa8.45□□□□□ -1.06
SMAD1-216ENST00000515527 LPAR6P43657 344 aa8.45□□□□□ -1.06
SMAD1-216ENST00000515527 ARPC4P59998 168 aa8.45□□□□□ -1.06
SMAD1-216ENST00000515527 YPEL3P61236 119 aaPredicted RBP8.45□□□□□ -1.06
SMAD1-216ENST00000515527 DAZ2Q13117 558 aaKnown RBP8.45□□□□□ -1.06
SMAD1-216ENST00000515527 SLAQ13239 276 aa8.45□□□□□ -1.06
SMAD1-216ENST00000515527 OR4A16Q8NH70 328 aa8.45□□□□□ -1.06
SMAD1-216ENST00000515527 BLNKQ8WV28 456 aa8.45□□□□□ -1.06
SMAD1-216ENST00000515527 PCNPQ8WW12 178 aaKnown RBP8.45□□□□□ -1.06
SMAD1-216ENST00000515527 TRGV1A0A0A0MS02 117 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 ERICH4A6NGS2 130 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 OR5AC1P0C628 307 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 HIST1H1DP16402 221 aaKnown RBP8.44□□□□□ -1.06
SMAD1-216ENST00000515527 OR10J1P30954 320 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 SRSF3P84103 164 aaKnown RBP8.44□□□□□ -1.06
SMAD1-216ENST00000515527 INSL4Q14641 139 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 HACD4Q5VWC8 232 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 CNIH2Q6PI25 160 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 OR51G1Q8NGK1 321 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 PBDC1Q9BVG4 233 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 SLC5A7Q9GZV3 580 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 DAPK2Q9UIK4 370 aa8.44□□□□□ -1.06
SMAD1-216ENST00000515527 RNF222A6NCQ9 220 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 DTYMKP23919 212 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 MEOX2P50222 304 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 SUB1P53999 127 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMAD1-216ENST00000515527 SCAND1P57086 179 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 LAGE3Q14657 143 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 PRR4Q16378 134 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 PSG3Q16557 428 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 OR10R2Q8NGX6 335 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 FCAMRQ8WWV6 532 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 PHYHIPQ92561 330 aa8.43□□□□□ -1.06
SMAD1-216ENST00000515527 FGF20Q9NP95 211 aaPredicted RBP8.43□□□□□ -1.06
SMAD1-216ENST00000515527 MRPS18AQ9NVS2 196 aaKnown RBP8.43□□□□□ -1.06
SMAD1-216ENST00000515527 SLC17A2O00624 439 aa8.42□□□□□ -1.06
SMAD1-216ENST00000515527 RD3LP0DJH9 198 aa8.42□□□□□ -1.06
SMAD1-216ENST00000515527 F2RP25116 425 aa8.42□□□□□ -1.06
SMAD1-216ENST00000515527 HSPA13P48723 471 aa8.42□□□□□ -1.06
SMAD1-216ENST00000515527 RND2P52198 227 aa8.42□□□□□ -1.06
SMAD1-216ENST00000515527 HSPE1P61604 102 aaKnown RBP8.42□□□□□ -1.06
SMAD1-216ENST00000515527 HIST1H1AQ02539 215 aaPredicted RBP8.42□□□□□ -1.06
SMAD1-216ENST00000515527 MS4A15Q8N5U1 240 aa8.42□□□□□ -1.06
SMAD1-216ENST00000515527 ELF5Q9UKW6 265 aaPredicted RBP8.42□□□□□ -1.06
SMAD1-216ENST00000515527 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
SMAD1-216ENST00000515527 GABRB1P18505 474 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 MYL12AP19105 171 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 FCGR2CP31995 323 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 FXYD4P59646 89 aa8.41□□□□□ -1.06
SMAD1-216ENST00000515527 SUPT4H1P63272 117 aaKnown RBP8.41□□□□□ -1.06
SMAD1-216ENST00000515527 ZNF818PQ6ZRF7 136 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms