RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PUS1Q9Y606 427 aaKnown RBP eCLIP16.05■□□□□ 0.16
LSM6-207ENST00000515311 A8MWP6 167 aa16.04■□□□□ 0.16
LSM6-207ENST00000515311 CAMLGP49069 296 aa16.04■□□□□ 0.16
LSM6-207ENST00000515311 TOMM20LQ6UXN7 152 aa16.04■□□□□ 0.16
LSM6-207ENST00000515311 UNQ9165/PRO28630Q6UXU0 137 aa16.04■□□□□ 0.16
LSM6-207ENST00000515311 OR51G1Q8NGK1 321 aa16.04■□□□□ 0.16
LSM6-207ENST00000515311 SCGB1C1Q8TD33 95 aa16.04■□□□□ 0.16
LSM6-207ENST00000515311 ARPC5LQ9BPX5 153 aa16.04■□□□□ 0.16
LSM6-207ENST00000515311 ZFAND3Q9H8U3 227 aa16.04■□□□□ 0.16
LSM6-207ENST00000515311 SLC45A2Q9UMX9 530 aa16.04■□□□□ 0.16
LSM6-207ENST00000515311 YIF1AO95070 293 aa16.03■□□□□ 0.16
LSM6-207ENST00000515311 LGALSLQ3ZCW2 172 aaPredicted RBP16.03■□□□□ 0.16
LSM6-207ENST00000515311 BPIFCQ8NFQ6 507 aa16.03■□□□□ 0.16
LSM6-207ENST00000515311 GGTLC1Q9BX51 225 aa16.03■□□□□ 0.16
LSM6-207ENST00000515311 NPCDR1Q9BY65 106 aa16.03■□□□□ 0.16
LSM6-207ENST00000515311 UFC1Q9Y3C8 167 aa16.03■□□□□ 0.16
LSM6-207ENST00000515311 BORCS7-ASMTA0A0B4J1R7 106 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 WI2-2373I1.2A0A1W2PRP0 233 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 ZNF320A2RRD8 509 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 OVOL1O14753 267 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 RPL29P47914 159 aaKnown RBP16.02■□□□□ 0.16
LSM6-207ENST00000515311 ELLP55199 621 aaPredicted RBP16.02■□□□□ 0.16
LSM6-207ENST00000515311 OPCMLQ14982 345 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 TMUB2Q71RG4 321 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 OR9G4Q8NGQ1 327 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 RCC1LQ96I51 464 aaKnown RBP16.02■□□□□ 0.16
LSM6-207ENST00000515311 GINS3Q9BRX5 216 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 ARL6Q9H0F7 186 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 DAZ1Q9NQZ3 744 aaKnown RBP16.02■□□□□ 0.16
LSM6-207ENST00000515311 KCNIP2Q9NS61 270 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 PEMTQ9UBM1 199 aa16.02■□□□□ 0.16
LSM6-207ENST00000515311 KANTRA0A1W2PQU2 76 aa16.01■□□□□ 0.15
LSM6-207ENST00000515311 K7EMT4 169 aa16.01■□□□□ 0.15
LSM6-207ENST00000515311 BCL2L11O43521 198 aa16.01■□□□□ 0.15
LSM6-207ENST00000515311 JTBO76095 146 aa16.01■□□□□ 0.15
LSM6-207ENST00000515311 IL4P05112 153 aa16.01■□□□□ 0.15
LSM6-207ENST00000515311 RPL7L1Q6DKI1 246 aaKnown RBP16.01■□□□□ 0.15
LSM6-207ENST00000515311 TMEM182Q6ZP80 229 aaPredicted RBP16.01■□□□□ 0.15
LSM6-207ENST00000515311 C9orf62Q8N4C0 152 aa16.01■□□□□ 0.15
LSM6-207ENST00000515311 ZNF709Q8N972 641 aa16.01■□□□□ 0.15
LSM6-207ENST00000515311 RNF125Q96EQ8 232 aa16.01■□□□□ 0.15
LSM6-207ENST00000515311 CYTL1Q9NRR1 136 aa16.01■□□□□ 0.15
LSM6-207ENST00000515311 C17orf112F2Z3M2 114 aa16■□□□□ 0.15
LSM6-207ENST00000515311 LINC00869P0C866 280 aa16■□□□□ 0.15
LSM6-207ENST00000515311 PRR20EP86478 221 aa16■□□□□ 0.15
LSM6-207ENST00000515311 PRR20CP86479 221 aa16■□□□□ 0.15
LSM6-207ENST00000515311 PRR20DP86480 221 aa16■□□□□ 0.15
LSM6-207ENST00000515311 PRR20BP86481 221 aa16■□□□□ 0.15
LSM6-207ENST00000515311 PRR20AP86496 221 aa16■□□□□ 0.15
LSM6-207ENST00000515311 PXDC1Q5TGL8 231 aa16■□□□□ 0.15
LSM6-207ENST00000515311 WFDC9Q8NEX5 89 aa16■□□□□ 0.15
LSM6-207ENST00000515311 C20orf24Q9BUV8 137 aa16■□□□□ 0.15
LSM6-207ENST00000515311 TMEM213A2RRL7 107 aa15.99■□□□□ 0.15
LSM6-207ENST00000515311 GATA2P23769 480 aaPredicted RBP15.99■□□□□ 0.15
LSM6-207ENST00000515311 PLP1P60201 277 aa15.99■□□□□ 0.15
LSM6-207ENST00000515311 STPG3Q8N7X2 389 aa15.99■□□□□ 0.15
LSM6-207ENST00000515311 TIMM9Q9Y5J7 89 aa15.99■□□□□ 0.15
LSM6-207ENST00000515311 IGHV3OR16-8A0A075B7F1 116 aa15.98■□□□□ 0.15
LSM6-207ENST00000515311 LYZP61626 148 aa15.98■□□□□ 0.15
LSM6-207ENST00000515311 USF2Q15853 346 aaPredicted RBP15.98■□□□□ 0.15
LSM6-207ENST00000515311 LAMTOR1Q6IAA8 161 aa15.98■□□□□ 0.15
LSM6-207ENST00000515311 MARC2Q969Z3 335 aa15.98■□□□□ 0.15
LSM6-207ENST00000515311 METTL26Q96S19 204 aa15.98■□□□□ 0.15
LSM6-207ENST00000515311 RSG1Q9BU20 258 aa15.98■□□□□ 0.15
LSM6-207ENST00000515311 SLC39A9Q9NUM3 307 aa15.98■□□□□ 0.15
LSM6-207ENST00000515311 PXMP4Q9Y6I8 212 aa15.98■□□□□ 0.15
LSM6-207ENST00000515311 C2orf70A6NJV1 201 aa15.97■□□□□ 0.15
LSM6-207ENST00000515311 C4BPBP20851 252 aa15.97■□□□□ 0.15
LSM6-207ENST00000515311 TM4SF20Q53R12 229 aa15.97■□□□□ 0.15
LSM6-207ENST00000515311 PRR31Q5SQ13 230 aa15.97■□□□□ 0.15
LSM6-207ENST00000515311 MIC13Q5XKP0 118 aa15.97■□□□□ 0.15
LSM6-207ENST00000515311 IL34Q6ZMJ4 242 aa15.97■□□□□ 0.15
LSM6-207ENST00000515311 GNPNAT1Q96EK6 184 aaPredicted RBP15.97■□□□□ 0.15
LSM6-207ENST00000515311 ELOVL1Q9BW60 279 aa15.97■□□□□ 0.15
LSM6-207ENST00000515311 ARV1Q9H2C2 271 aa15.97■□□□□ 0.15
LSM6-207ENST00000515311 SIGLEC8Q9NYZ4 499 aa15.97■□□□□ 0.15
LSM6-207ENST00000515311 PKD1L1Q8TDX9 2849 aa15.96■□□□□ 0.15
LSM6-207ENST00000515311 CD33P20138 364 aa15.96■□□□□ 0.15
LSM6-207ENST00000515311 CRYBB3P26998 211 aa15.96■□□□□ 0.15
LSM6-207ENST00000515311 NKX2-5P52952 324 aaPredicted RBP15.96■□□□□ 0.15
LSM6-207ENST00000515311 B2MP61769 119 aa15.96■□□□□ 0.15
LSM6-207ENST00000515311 Q6ZRG5 221 aa15.96■□□□□ 0.15
LSM6-207ENST00000515311 HSD17B11Q8NBQ5 300 aa15.96■□□□□ 0.15
LSM6-207ENST00000515311 PSMG3Q9BT73 122 aaPredicted RBP15.96■□□□□ 0.15
LSM6-207ENST00000515311 MCRIP2Q9BUT9 160 aaKnown RBP15.96■□□□□ 0.15
LSM6-207ENST00000515311 PBDC1Q9BVG4 233 aa15.96■□□□□ 0.15
LSM6-207ENST00000515311 ZNF471Q9BX82 626 aaPredicted RBP15.96■□□□□ 0.15
LSM6-207ENST00000515311 MRPL27Q9P0M9 148 aaKnown RBP15.96■□□□□ 0.15
LSM6-207ENST00000515311 RABAC1Q9UI14 185 aa15.96■□□□□ 0.15
LSM6-207ENST00000515311 ZNF207O43670 478 aaKnown RBP15.95■□□□□ 0.14
LSM6-207ENST00000515311 HYPMO75409 117 aa15.95■□□□□ 0.14
LSM6-207ENST00000515311 CSN3P07498 182 aa15.95■□□□□ 0.14
LSM6-207ENST00000515311 C8orf88P0DMB2 117 aa15.95■□□□□ 0.14
LSM6-207ENST00000515311 ORM2P19652 201 aa15.95■□□□□ 0.14
LSM6-207ENST00000515311 CBLN1P23435 193 aa15.95■□□□□ 0.14
LSM6-207ENST00000515311 NPPCP23582 126 aa15.95■□□□□ 0.14
LSM6-207ENST00000515311 ATP6V0CP27449 155 aa15.95■□□□□ 0.14
LSM6-207ENST00000515311 EIF5AP63241 154 aaKnown RBP15.95■□□□□ 0.14
LSM6-207ENST00000515311 PPP1R14BQ96C90 147 aa15.95■□□□□ 0.14
LSM6-207ENST00000515311 PFDN2Q9UHV9 154 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms