RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 CACNG5Q9UF02 275 aa16.21■□□□□ 0.19
SMAD1-214ENST00000514831 OR5AC1P0C628 307 aa16.2■□□□□ 0.18
SMAD1-214ENST00000514831 PSG1P11464 419 aa16.2■□□□□ 0.18
SMAD1-214ENST00000514831 NCS1P62166 190 aa16.2■□□□□ 0.18
SMAD1-214ENST00000514831 OR4D10Q8NGI6 311 aa16.2■□□□□ 0.18
SMAD1-214ENST00000514831 OR51G1Q8NGK1 321 aa16.2■□□□□ 0.18
SMAD1-214ENST00000514831 OR52I2Q8NH67 350 aa16.2■□□□□ 0.18
SMAD1-214ENST00000514831 RNF125Q96EQ8 232 aa16.2■□□□□ 0.18
SMAD1-214ENST00000514831 ABHD1Q96SE0 405 aa16.2■□□□□ 0.18
SMAD1-214ENST00000514831 HSPG2P98160 4391 aa16.2■□□□□ 0.18
SMAD1-214ENST00000514831 CEBPZOSA8MTT3 80 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 HTN3P15516 51 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 PSMB3P49720 205 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 OR8G2PQ6IF36 304 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 NOXA1Q86UR1 476 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 MARCH1Q8TCQ1 289 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 GLYATL2Q8WU03 294 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 WDR12Q9GZL7 423 aaKnown RBP16.19■□□□□ 0.18
SMAD1-214ENST00000514831 VCX3AQ9NNX9 186 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 PLA2G2EQ9NZK7 142 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 GOLT1BQ9Y3E0 138 aa16.19■□□□□ 0.18
SMAD1-214ENST00000514831 SOCS3O14543 225 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 HBE1P02100 147 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 ID1P41134 155 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 FAM3BP58499 235 aaPredicted RBP16.18■□□□□ 0.18
SMAD1-214ENST00000514831 ZNF79Q15937 498 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 SCGB2B2Q4G0G5 96 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 NMSQ5H8A3 153 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 SPATA31B1PQ5VZV4 182 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 TMEM88Q6PEY1 159 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 GPR146Q96CH1 333 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 LINC00052Q96N35 136 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 SLC35B3Q9H1N7 401 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 PFDN2Q9UHV9 154 aa16.18■□□□□ 0.18
SMAD1-214ENST00000514831 YTHDF2Q9Y5A9 579 aaKnown RBP16.18■□□□□ 0.18
SMAD1-214ENST00000514831 LOC102723971A0A1B0GUV8 181 aa16.17■□□□□ 0.18
SMAD1-214ENST00000514831 FAM25AB3EWG3 89 aa16.17■□□□□ 0.18
SMAD1-214ENST00000514831 FAM25CB3EWG5 89 aa16.17■□□□□ 0.18
SMAD1-214ENST00000514831 FAM25GB3EWG6 89 aa16.17■□□□□ 0.18
SMAD1-214ENST00000514831 RORCP51449 518 aa16.17■□□□□ 0.18
SMAD1-214ENST00000514831 SELENOHQ8IZQ5 122 aaKnown RBP16.17■□□□□ 0.18
SMAD1-214ENST00000514831 OR4B1Q8NGF8 309 aa16.17■□□□□ 0.18
SMAD1-214ENST00000514831 COQ8AQ8NI60 647 aa16.17■□□□□ 0.18
SMAD1-214ENST00000514831 NAA60Q9H7X0 242 aa16.17■□□□□ 0.18
SMAD1-214ENST00000514831 TEX13DA0A0J9YY54 714 aaPredicted RBP16.16■□□□□ 0.18
SMAD1-214ENST00000514831 CDK2AP2O75956 126 aa16.16■□□□□ 0.18
SMAD1-214ENST00000514831 PAX9P55771 341 aa16.16■□□□□ 0.18
SMAD1-214ENST00000514831 TAS2R19P59542 299 aa16.16■□□□□ 0.18
SMAD1-214ENST00000514831 C1orf158Q8N1D5 194 aa16.16■□□□□ 0.18
SMAD1-214ENST00000514831 C15orf53Q8NAA6 179 aa16.16■□□□□ 0.18
SMAD1-214ENST00000514831 TMEM229BQ8NBD8 167 aa16.16■□□□□ 0.18
SMAD1-214ENST00000514831 PBDC1Q9BVG4 233 aa16.16■□□□□ 0.18
SMAD1-214ENST00000514831 CACFD1Q9UGQ2 172 aa16.16■□□□□ 0.18
SMAD1-214ENST00000514831 C14orf166Q9Y224 244 aaKnown RBP16.16■□□□□ 0.18
SMAD1-214ENST00000514831 TNFAIP8O95379 198 aa16.15■□□□□ 0.18
SMAD1-214ENST00000514831 RAB3DO95716 219 aa16.15■□□□□ 0.18
SMAD1-214ENST00000514831 VBP1P61758 197 aa16.15■□□□□ 0.18
SMAD1-214ENST00000514831 DAD1P61803 113 aa16.15■□□□□ 0.18
SMAD1-214ENST00000514831 PSG9Q00887 426 aa16.15■□□□□ 0.18
SMAD1-214ENST00000514831 A0A087WXM4 84 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 C16orf90A8MZG2 172 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 SUPT4H1P63272 117 aaKnown RBP16.14■□□□□ 0.17
SMAD1-214ENST00000514831 MEF2DQ14814 521 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 RRN3P1Q2M238 152 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 C1orf194Q5T5A4 169 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 TMEM268Q5VZI3 342 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 MZT2AQ6P582 158 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 C7orf50Q9BRJ6 194 aaKnown RBP16.14■□□□□ 0.17
SMAD1-214ENST00000514831 RTBDNQ9BSG5 229 aaPredicted RBP16.14■□□□□ 0.17
SMAD1-214ENST00000514831 FUNDC2Q9BWH2 189 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 EXTL2Q9UBQ6 330 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 TMED3Q9Y3Q3 217 aa16.14■□□□□ 0.17
SMAD1-214ENST00000514831 ISLRO14498 428 aa16.13■□□□□ 0.17
SMAD1-214ENST00000514831 ALDH3B2P48448 385 aa16.13■□□□□ 0.17
SMAD1-214ENST00000514831 TNP2Q05952 138 aa16.13■□□□□ 0.17
SMAD1-214ENST00000514831 SURF2Q15527 256 aaPredicted RBP16.13■□□□□ 0.17
SMAD1-214ENST00000514831 FAM78BQ5VT40 261 aa16.13■□□□□ 0.17
SMAD1-214ENST00000514831 GPR107Q5VW38 600 aa16.13■□□□□ 0.17
SMAD1-214ENST00000514831 STEAP1BQ6NZ63 245 aa16.13■□□□□ 0.17
SMAD1-214ENST00000514831 EBLN2Q6P2I7 272 aa16.13■□□□□ 0.17
SMAD1-214ENST00000514831 A0A0J9YX75 114 aa16.12■□□□□ 0.17
SMAD1-214ENST00000514831 KLF9Q13886 244 aaPredicted RBP16.12■□□□□ 0.17
SMAD1-214ENST00000514831 C15orf40Q8WUR7 153 aa16.12■□□□□ 0.17
SMAD1-214ENST00000514831 TMEM56-RWDD3S4R434 201 aa16.12■□□□□ 0.17
SMAD1-214ENST00000514831 U3KQ87 197 aa16.12■□□□□ 0.17
SMAD1-214ENST00000514831 IGKV1D-37A0A075B6S9 117 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 CRYM-AS1A6NIL9 109 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 ZFP92A6NM28 416 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 F6UB75 175 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 SULT1A3P0DMM9 295 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 SULT1A4P0DMN0 295 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 SAMD13Q5VXD3 122 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 FAAP20Q6NZ36 180 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 MAPKAPK5-AS1Q8N8E1 139 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 AP3S1Q92572 193 aa16.11■□□□□ 0.17
SMAD1-214ENST00000514831 A8MTW9 85 aa16.1■□□□□ 0.17
SMAD1-214ENST00000514831 LYZP61626 148 aa16.1■□□□□ 0.17
SMAD1-214ENST00000514831 ZNF90Q03938 601 aa16.1■□□□□ 0.17
SMAD1-214ENST00000514831 GSG1LQ6UXU4 331 aa16.1■□□□□ 0.17
SMAD1-214ENST00000514831 LGI3Q8N145 548 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms