RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 SLC35E1Q96K37 410 aa16.91■□□□□ 0.3
CLDND1-230ENST00000514537 NDUFA13Q9P0J0 144 aa16.91■□□□□ 0.3
CLDND1-230ENST00000514537 FLVCR2Q9UPI3 526 aa16.91■□□□□ 0.3
CLDND1-230ENST00000514537 LINC00854A0A1B0GVQ3 168 aa16.9■□□□□ 0.3
CLDND1-230ENST00000514537 SYNGR2O43760 224 aa16.9■□□□□ 0.3
CLDND1-230ENST00000514537 ATF4P18848 351 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-230ENST00000514537 OR51G1Q8NGK1 321 aa16.9■□□□□ 0.3
CLDND1-230ENST00000514537 CIB3Q96Q77 187 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-230ENST00000514537 MAGT1Q9H0U3 335 aa16.9■□□□□ 0.3
CLDND1-230ENST00000514537 ZFP92A6NM28 416 aa16.89■□□□□ 0.29
CLDND1-230ENST00000514537 BTCP35070 178 aa16.89■□□□□ 0.29
CLDND1-230ENST00000514537 ZNF90Q03938 601 aa16.89■□□□□ 0.29
CLDND1-230ENST00000514537 DHRS2Q13268 280 aa16.89■□□□□ 0.29
CLDND1-230ENST00000514537 RNF125Q96EQ8 232 aa16.89■□□□□ 0.29
CLDND1-230ENST00000514537 C7orf50Q9BRJ6 194 aaKnown RBP16.89■□□□□ 0.29
CLDND1-230ENST00000514537 CENPXA8MT69 81 aa16.88■□□□□ 0.29
CLDND1-230ENST00000514537 ZNF688P0C7X2 276 aa16.88■□□□□ 0.29
CLDND1-230ENST00000514537 IL7P13232 177 aa16.88■□□□□ 0.29
CLDND1-230ENST00000514537 RPP30P78346 268 aaKnown RBP16.88■□□□□ 0.29
CLDND1-230ENST00000514537 STHQ8IWL8 128 aa16.88■□□□□ 0.29
CLDND1-230ENST00000514537 WRBO00258 174 aa16.87■□□□□ 0.29
CLDND1-230ENST00000514537 ADAP1O75689 374 aa16.87■□□□□ 0.29
CLDND1-230ENST00000514537 CA1P00915 261 aaPredicted RBP16.87■□□□□ 0.29
CLDND1-230ENST00000514537 OR4E1P0C645 316 aa16.87■□□□□ 0.29
CLDND1-230ENST00000514537 ID3Q02535 119 aa16.87■□□□□ 0.29
CLDND1-230ENST00000514537 RARRES2Q99969 163 aa16.87■□□□□ 0.29
CLDND1-230ENST00000514537 PAIP2BQ9ULR5 123 aaKnown RBP16.87■□□□□ 0.29
CLDND1-230ENST00000514537 ALMS1Q8TCU4 4167 aa16.87■□□□□ 0.29
CLDND1-230ENST00000514537 HYDINQ4G0P3 5121 aa16.86■□□□□ 0.29
CLDND1-230ENST00000514537 PRSS46E5RG02 174 aa16.86■□□□□ 0.29
CLDND1-230ENST00000514537 OR8G2PQ6IF36 304 aa16.86■□□□□ 0.29
CLDND1-230ENST00000514537 TRPT1Q86TN4 253 aaKnown RBP16.86■□□□□ 0.29
CLDND1-230ENST00000514537 TMEM217Q8N7C4 229 aa16.86■□□□□ 0.29
CLDND1-230ENST00000514537 COQ8AQ8NI60 647 aa16.86■□□□□ 0.29
CLDND1-230ENST00000514537 TRGV9Q99603 122 aa16.86■□□□□ 0.29
CLDND1-230ENST00000514537 PBDC1Q9BVG4 233 aa16.86■□□□□ 0.29
CLDND1-230ENST00000514537 JTBO76095 146 aa16.85■□□□□ 0.29
CLDND1-230ENST00000514537 FABP1P07148 127 aa16.85■□□□□ 0.29
CLDND1-230ENST00000514537 ANXA7P20073 488 aaKnown RBP16.85■□□□□ 0.29
CLDND1-230ENST00000514537 SIGLEC15Q6ZMC9 328 aa16.85■□□□□ 0.29
CLDND1-230ENST00000514537 THAP8Q8NA92 274 aa16.85■□□□□ 0.29
CLDND1-230ENST00000514537 OR11H2Q8NH07 326 aa16.85■□□□□ 0.29
CLDND1-230ENST00000514537 SEPSECSQ9HD40 501 aaKnown RBP16.85■□□□□ 0.29
CLDND1-230ENST00000514537 NRN1Q9NPD7 142 aa16.85■□□□□ 0.29
CLDND1-230ENST00000514537 IGKV1OR2-108A0A075B7D4 117 aa16.84■□□□□ 0.29
CLDND1-230ENST00000514537 CXorf65A6NEN9 183 aa16.84■□□□□ 0.29
CLDND1-230ENST00000514537 KNCNA6PVL3 124 aa16.84■□□□□ 0.29
CLDND1-230ENST00000514537 SNRPGP15A8MWD9 76 aa16.84■□□□□ 0.29
CLDND1-230ENST00000514537 GIG44P09565 113 aaPredicted RBP16.84■□□□□ 0.29
CLDND1-230ENST00000514537 NUP62P37198 522 aaPredicted RBP16.84■□□□□ 0.29
CLDND1-230ENST00000514537 SPANXN5Q5MJ07 72 aa16.84■□□□□ 0.29
CLDND1-230ENST00000514537 PFDN2Q9UHV9 154 aa16.84■□□□□ 0.29
CLDND1-230ENST00000514537 PLA2G10O15496 165 aa16.83■□□□□ 0.28
CLDND1-230ENST00000514537 IFNA21P01568 189 aa16.83■□□□□ 0.28
CLDND1-230ENST00000514537 PMS2P11Q13670 270 aa16.83■□□□□ 0.28
CLDND1-230ENST00000514537 CNPY1Q3B7I2 92 aa16.83■□□□□ 0.28
CLDND1-230ENST00000514537 C4orf46Q504U0 113 aa16.83■□□□□ 0.28
CLDND1-230ENST00000514537 PSMG4Q5JS54 123 aa16.83■□□□□ 0.28
CLDND1-230ENST00000514537 ACTL10Q5JWF8 245 aa16.83■□□□□ 0.28
CLDND1-230ENST00000514537 OR4D5Q8NGN0 318 aa16.83■□□□□ 0.28
CLDND1-230ENST00000514537 RAB40CQ96S21 281 aa16.83■□□□□ 0.28
CLDND1-230ENST00000514537 SPP1P10451 314 aa16.82■□□□□ 0.28
CLDND1-230ENST00000514537 LYZP61626 148 aa16.82■□□□□ 0.28
CLDND1-230ENST00000514537 POLR2GP62487 172 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLDND1-230ENST00000514537 OR2F1Q13607 317 aa16.82■□□□□ 0.28
CLDND1-230ENST00000514537 MORN3Q6PF18 240 aaPredicted RBP16.82■□□□□ 0.28
CLDND1-230ENST00000514537 STRAPQ9Y3F4 350 aaKnown RBP16.82■□□□□ 0.28
CLDND1-230ENST00000514537 H3BP45 60 aa16.81■□□□□ 0.28
CLDND1-230ENST00000514537 NKX2-1P43699 371 aaPredicted RBP16.81■□□□□ 0.28
CLDND1-230ENST00000514537 SNRPD3P62318 126 aaKnown RBP16.81■□□□□ 0.28
CLDND1-230ENST00000514537 TMEM41BQ5BJD5 291 aa16.81■□□□□ 0.28
CLDND1-230ENST00000514537 C1orf194Q5T5A4 169 aa16.81■□□□□ 0.28
CLDND1-230ENST00000514537 AGRNO00468 2067 aa16.81■□□□□ 0.28
CLDND1-230ENST00000514537 NUPR2A6NF83 97 aa16.8■□□□□ 0.28
CLDND1-230ENST00000514537 CFDP00746 253 aaPredicted RBP16.8■□□□□ 0.28
CLDND1-230ENST00000514537 CEMP1Q6PRD7 247 aaPredicted RBP16.8■□□□□ 0.28
CLDND1-230ENST00000514537 MITD1Q8WV92 249 aa16.8■□□□□ 0.28
CLDND1-230ENST00000514537 C11orf68Q9H3H3 251 aaKnown RBP16.8■□□□□ 0.28
CLDND1-230ENST00000514537 LYRM1O43325 122 aa16.79■□□□□ 0.28
CLDND1-230ENST00000514537 PSENENQ9NZ42 101 aa16.79■□□□□ 0.28
CLDND1-230ENST00000514537 FBXL17Q9UF56 701 aa16.79■□□□□ 0.28
CLDND1-230ENST00000514537 C4BPBP20851 252 aa16.78■□□□□ 0.28
CLDND1-230ENST00000514537 SMIM8Q96KF7 97 aa16.78■□□□□ 0.28
CLDND1-230ENST00000514537 C20orf85Q9H1P6 137 aa16.78■□□□□ 0.28
CLDND1-230ENST00000514537 PMS2P5A8MQ11 134 aa16.77■□□□□ 0.28
CLDND1-230ENST00000514537 SSSCA1O60232 199 aa16.77■□□□□ 0.28
CLDND1-230ENST00000514537 PAX9P55771 341 aa16.77■□□□□ 0.28
CLDND1-230ENST00000514537 IAH1Q2TAA2 248 aaPredicted RBP16.77■□□□□ 0.28
CLDND1-230ENST00000514537 ACOT7LQ6ZUV0 252 aa16.77■□□□□ 0.28
CLDND1-230ENST00000514537 WDR12Q9GZL7 423 aaKnown RBP16.77■□□□□ 0.28
CLDND1-230ENST00000514537 AKR1C1Q04828 323 aa16.76■□□□□ 0.27
CLDND1-230ENST00000514537 TMEM182Q6ZP80 229 aaPredicted RBP16.76■□□□□ 0.27
CLDND1-230ENST00000514537 TMEM144Q7Z5S9 345 aa16.76■□□□□ 0.27
CLDND1-230ENST00000514537 PPP1R14BQ96C90 147 aa16.76■□□□□ 0.27
CLDND1-230ENST00000514537 SLC45A2Q9UMX9 530 aa16.76■□□□□ 0.27
CLDND1-230ENST00000514537 H3BMM0 161 aa16.75■□□□□ 0.27
CLDND1-230ENST00000514537 TCRBP04435 133 aa16.75■□□□□ 0.27
CLDND1-230ENST00000514537 OR8I2Q8N0Y5 310 aa16.75■□□□□ 0.27
CLDND1-230ENST00000514537 ZBTB8BQ8NAP8 495 aaPredicted RBP16.75■□□□□ 0.27
CLDND1-230ENST00000514537 CSNK1G2-AS1Q8NCQ2 148 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms