RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
CCL28-204ENST00000514421 SFT2D1Q8WV19 159 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 C4orf3Q8WVX3 66 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 NARS2Q96I59 477 aaKnown RBP6.45□□□□□ -1.38
CCL28-204ENST00000514421 P2RX4Q99571 388 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 MGST2Q99735 147 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 COMMD5Q9GZQ3 224 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 VSIRQ9H7M9 311 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 ENY2Q9NPA8 101 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 KCNIP2Q9NS61 270 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 FBN3Q75N90 2809 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 E7EUB6 86 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 AGPAT2O15120 278 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 SCO1O75880 301 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 SNAPINO95295 136 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 APELAP0DMC3 54 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 CD33P20138 364 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 RPL29P47914 159 aaKnown RBP6.44□□□□□ -1.38
CCL28-204ENST00000514421 WT1-ASQ06250 92 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 ICAM4Q14773 271 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 GUCA2BQ16661 112 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 ACOT6Q3I5F7 207 aaPredicted RBP6.44□□□□□ -1.38
CCL28-204ENST00000514421 C10orf55Q5SWW7 151 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 TEPPQ6URK8 271 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 SSX7Q7RTT5 188 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 TMEM144Q7Z5S9 345 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 ZNF709Q8N972 641 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 OR11H1Q8NG94 326 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 OR1N2Q8NGR9 330 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 DPF1Q92782 380 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 RAX2Q96IS3 184 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 USMG5Q96IX5 58 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 GGTLC1Q9BX51 225 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 NKX6-2Q9C056 277 aaPredicted RBP6.44□□□□□ -1.38
CCL28-204ENST00000514421 TMEM231Q9H6L2 316 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 GNB4Q9HAV0 340 aa6.44□□□□□ -1.38
CCL28-204ENST00000514421 IGLC7A0M8Q6 106 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 NPIPB5A8MRT5 1133 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 TEX22C9J3V5 150 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 DNASE2O00115 360 aaPredicted RBP6.43□□□□□ -1.38
CCL28-204ENST00000514421 CYB5BO43169 146 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 YIF1AO95070 293 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 IFNA4P05014 189 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 CRYGCP07315 174 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 SRP19P09132 144 aaKnown RBP6.43□□□□□ -1.38
CCL28-204ENST00000514421 BCL2P10415 239 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 MYOD1P15172 320 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 TPPP2P59282 170 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 ERHP84090 104 aaKnown RBP6.43□□□□□ -1.38
CCL28-204ENST00000514421 CD69Q07108 199 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 FFAR4Q5NUL3 377 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 LINC00482Q8N8I6 264 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 OR10W1Q8NGF6 305 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 OR10G9Q8NGN4 311 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 OR10G7Q8NGN6 311 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 DUX3Q96PT4 197 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 OR5B12Q96R08 314 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 MCRIP2Q9BUT9 160 aaKnown RBP6.43□□□□□ -1.38
CCL28-204ENST00000514421 ACTR3CQ9C0K3 210 aaPredicted RBP6.43□□□□□ -1.38
CCL28-204ENST00000514421 EIF5A2Q9GZV4 153 aaKnown RBP6.43□□□□□ -1.38
CCL28-204ENST00000514421 SLC39A9Q9NUM3 307 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 SLC45A2Q9UMX9 530 aa6.43□□□□□ -1.38
CCL28-204ENST00000514421 TRBV9A0A0B4J1U6 114 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 MAP1LC3B2A6NCE7 125 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 IGHV3-11P01762 117 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 LGALS1P09382 135 aaKnown RBP6.42□□□□□ -1.38
CCL28-204ENST00000514421 LINC00869P0C866 280 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 IGLL1P15814 213 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 CTRB1P17538 263 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 PSMB3P49720 205 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 PPT1P50897 306 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 SUB1P53999 127 aaKnown RBP eCLIP6.42□□□□□ -1.38
CCL28-204ENST00000514421 DEFA5Q01523 94 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 ATP5G2Q06055 141 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 BTN1A1Q13410 526 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 RAB31Q13636 194 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 GAMTQ14353 236 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 KLK9Q2XQG4 91 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 DEFB136Q30KP8 78 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 CTRB2Q6GPI1 263 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 THAP8Q8NA92 274 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 CLRN3Q8NCR9 226 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 RAB24Q969Q5 203 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 SLC35E1Q96K37 410 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 RARRES2Q99969 163 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 MAP1LC3BQ9GZQ8 125 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 VAX2Q9UIW0 290 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 KLK9Q9UKQ9 250 aa6.42□□□□□ -1.38
CCL28-204ENST00000514421 IGKV1OR2-108A0A075B7D4 117 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 SMCO3A2RU48 225 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 FAM223BA6NKX1 122 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 LINC01619G3V211 115 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 TMEM250H0YL14 139 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 IFNA1P01562 189 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 OR13C7P0DN81 318 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 DEFA4P12838 97 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 AREGP15514 252 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 HIST1H1BP16401 226 aaKnown RBP6.41□□□□□ -1.38
CCL28-204ENST00000514421 NPBWR1P48145 328 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms