RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 Q6ZS46 218 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 Q8N2B8 174 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 STXBP6Q8NFX7 210 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 NOL4LQ96MY1 436 aaPredicted RBP12.49□□□□□ -0.41
NUP54-214ENST00000514307 SLC25A22Q9H936 323 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 I3L521 148 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 IGHG4P01861 327 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 CTSGP08311 255 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 STAG3L2P0CL84 134 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 STAG3L3P0CL85 134 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 C8orf88P0DMB2 117 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 RAB9AP51151 201 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 TPPP2P59282 170 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 KHDC3LQ587J8 217 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 TEX38Q6PEX7 206 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 OR1B1Q8NGR6 318 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 SEPSECSQ9HD40 501 aaKnown RBP12.48□□□□□ -0.41
NUP54-214ENST00000514307 MANBALQ9NQG1 85 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 GNG13Q9P2W3 67 aa12.48□□□□□ -0.41
NUP54-214ENST00000514307 CD5P06127 495 aa12.47□□□□□ -0.41
NUP54-214ENST00000514307 FGF8P55075 233 aaPredicted RBP12.47□□□□□ -0.41
NUP54-214ENST00000514307 RELQ04864 619 aaPredicted RBP12.47□□□□□ -0.41
NUP54-214ENST00000514307 IQCF2Q8IXL9 164 aa12.47□□□□□ -0.41
NUP54-214ENST00000514307 SUN5Q8TC36 379 aa12.47□□□□□ -0.41
NUP54-214ENST00000514307 TMEM37Q8WXS4 190 aa12.47□□□□□ -0.41
NUP54-214ENST00000514307 GSX1Q9H4S2 264 aaPredicted RBP12.47□□□□□ -0.41
NUP54-214ENST00000514307 ZNF702PQ9H963 129 aa12.47□□□□□ -0.41
NUP54-214ENST00000514307 TMEM167BQ9NRX6 74 aa12.47□□□□□ -0.41
NUP54-214ENST00000514307 VAX2Q9UIW0 290 aa12.47□□□□□ -0.41
NUP54-214ENST00000514307 HIGD1AQ9Y241 93 aa12.47□□□□□ -0.41
NUP54-214ENST00000514307 ABCA1O95477 2261 aa12.47□□□□□ -0.41
NUP54-214ENST00000514307 WI2-2373I1.2A0A1W2PRP0 233 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 OR2T8A6NH00 312 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 DNAJC9-AS1A6NH13 148 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 HMGB3O15347 200 aaKnown RBP12.46□□□□□ -0.41
NUP54-214ENST00000514307 ELANEP08246 267 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 CFHR3Q02985 330 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 CLEC19AQ6UXS0 136 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 ZNF600Q6ZNG1 722 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 NARS2Q96I59 477 aaKnown RBP12.46□□□□□ -0.41
NUP54-214ENST00000514307 SMR3AQ99954 134 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 TXNDC17Q9BRA2 123 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 S4R3C0 116 aa12.46□□□□□ -0.41
NUP54-214ENST00000514307 TMEM218A2RU14 115 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 PSMB11A5LHX3 300 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 NDUFS6O75380 124 aaKnown RBP12.45□□□□□ -0.42
NUP54-214ENST00000514307 OR2C1O95371 312 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 IGHV3-23P01764 117 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 LYZP61626 148 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 FOXE3Q13461 319 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 HAGHQ16775 308 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 TOR2AQ5JU69 321 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 ZNF506Q5JVG8 444 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 PATE2Q6UY27 113 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 MIR17HGQ75NE6 70 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 SSX7Q7RTT5 188 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 LINC00305Q7Z4B0 112 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 ZNF491Q8N8L2 437 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 SLC35B3Q9H1N7 401 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 MRPL27Q9P0M9 148 aaKnown RBP12.45□□□□□ -0.42
NUP54-214ENST00000514307 DOK5Q9P104 306 aa12.45□□□□□ -0.42
NUP54-214ENST00000514307 FAM181BA6NEQ2 426 aa12.44□□□□□ -0.42
NUP54-214ENST00000514307 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
NUP54-214ENST00000514307 TGOLN2O43493 480 aa12.44□□□□□ -0.42
NUP54-214ENST00000514307 HSPB1P04792 205 aaKnown RBP12.44□□□□□ -0.42
NUP54-214ENST00000514307 RNASE1P07998 156 aaKnown RBP12.44□□□□□ -0.42
NUP54-214ENST00000514307 GCHFRP30047 84 aa12.44□□□□□ -0.42
NUP54-214ENST00000514307 GPR183P32249 361 aa12.44□□□□□ -0.42
NUP54-214ENST00000514307 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
NUP54-214ENST00000514307 DUX5Q96PT3 197 aa12.44□□□□□ -0.42
NUP54-214ENST00000514307 PLXNB1O43157 2135 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.43□□□□□ -0.42
NUP54-214ENST00000514307 LOC102723971A0A1B0GUV8 181 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 BMPR1BO00238 502 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 OR7C2O60412 319 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 IL4P05112 153 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 ARL14EPLP0DKL9 152 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 BCL2P10415 239 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 PSMB8P28062 276 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 ZNF343Q6P1L6 599 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 ZNF329Q86UD4 541 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 OR51M1Q9H341 326 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 GNB4Q9HAV0 340 aa12.43□□□□□ -0.42
NUP54-214ENST00000514307 HIVEP1P15822 2718 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 ITPR3Q14573 2671 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 HILS1P60008 231 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 SPATA31B1PQ5VZV4 182 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 OR4X2Q8NGF9 303 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 RXFP4Q8TDU9 374 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 RARRES2Q99969 163 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 CHRDL1Q9BU40 450 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 PAXXQ9BUH6 204 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 SCRT1Q9BWW7 348 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 NKX6-2Q9C056 277 aaPredicted RBP12.42□□□□□ -0.42
NUP54-214ENST00000514307 KLK15Q9H2R5 256 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 TMPRSS5Q9H3S3 457 aa12.42□□□□□ -0.42
NUP54-214ENST00000514307 F8W036 122 aa12.41□□□□□ -0.42
NUP54-214ENST00000514307 PAGE4O60829 102 aa12.41□□□□□ -0.42
NUP54-214ENST00000514307 ZP3P21754 424 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms