RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 SLC35E1Q96K37 410 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 RAB40CQ96S21 281 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 SPAG8Q99932 426 aaPredicted RBP6.18□□□□□ -1.42
NEDD4-210ENST00000513957 FAM110AQ9BQ89 295 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 MLXQ9UH92 298 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 TRAV14DV4A0A0A6YYC5 116 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 TRAV34A0A0B4J273 112 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 FNDC10F2Z333 226 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 TSC22D2O75157 780 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 YIF1AO95070 293 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 CFDP00746 253 aaPredicted RBP6.17□□□□□ -1.42
NEDD4-210ENST00000513957 IGKV1-17P01599 117 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 OR10J1P30954 320 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 RND2P52198 227 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 RAP2BP61225 183 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 CST9LP1Q5W188 147 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 BTNL8Q6UX41 500 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 TOMM20LQ6UXN7 152 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 NRARPQ7Z6K4 114 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 WFDC3Q8IUB2 231 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 TMEM61Q8N0U2 210 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 C12orf45Q8N5I9 185 aaPredicted RBP6.17□□□□□ -1.42
NEDD4-210ENST00000513957 ZBTB8BQ8NAP8 495 aaPredicted RBP6.17□□□□□ -1.42
NEDD4-210ENST00000513957 OR52B4Q8NGK2 314 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 Q8WTZ3 238 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 SMIM8Q96KF7 97 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 METTL26Q96S19 204 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 MARVELD1Q9BSK0 173 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 SPXQ9BT56 116 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 C20orf24Q9BUV8 137 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 SMPXQ9UHP9 88 aa6.17□□□□□ -1.42
NEDD4-210ENST00000513957 STRAPQ9Y3F4 350 aaKnown RBP6.17□□□□□ -1.42
NEDD4-210ENST00000513957 PUS1Q9Y606 427 aaKnown RBP eCLIP6.17□□□□□ -1.42
NEDD4-210ENST00000513957 TRAV2A0A0B4J234 112 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 IGHV3-35A0A0C4DH35 117 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 OR4C46A6NHA9 309 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 MPTX1A8MV57 137 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 PTTG1O95997 202 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 TOMM40O96008 361 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 IGHV3-48P01763 117 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 IAPPP10997 89 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 PVALBP20472 110 aaPredicted RBP6.16□□□□□ -1.42
NEDD4-210ENST00000513957 NPPCP23582 126 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 S100A7P31151 101 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 EIF2B2P49770 351 aaKnown RBP6.16□□□□□ -1.42
NEDD4-210ENST00000513957 CMC4P56277 68 aaPredicted RBP6.16□□□□□ -1.42
NEDD4-210ENST00000513957 CD81P60033 236 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 PAFAH1B2P68402 229 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 IFITM3Q01628 133 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 WDR73Q6P4I2 378 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 GSG1LQ6UXU4 331 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 HAPLN4Q86UW8 402 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 GRAMD2BQ96HH9 432 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 ZNF414Q96IQ9 312 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 SEC22CQ9BRL7 303 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 GGACTQ9BVM4 153 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 VSIRQ9H7M9 311 aa6.16□□□□□ -1.42
NEDD4-210ENST00000513957 IZUMO1RA6ND01 250 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 C5orf51A6NDU8 294 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 ZFP92A6NM28 416 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 PRSS46E5RG02 174 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 INMT-MINDY4F8WBC2 141 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 CHEK1O14757 476 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 SSSCA1O60232 199 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 RD3LP0DJH9 198 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 IGHV4-30-4P0DP06 118 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 CRYBB3P26998 211 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 POLR2GP62487 172 aaKnown RBP eCLIP6.15□□□□□ -1.42
NEDD4-210ENST00000513957 CYCSP99999 105 aaKnown RBP6.15□□□□□ -1.42
NEDD4-210ENST00000513957 GAMTQ14353 236 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 GUCA2BQ16661 112 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 SPANXN5Q5MJ07 72 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 OR8G2PQ6IF36 304 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 TMEM14EPQ6UXP3 125 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 THAP8Q8NA92 274 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 OR51G1Q8NGK1 321 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 NPIPB3Q92617 1050 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 ACY3Q96HD9 319 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 C2orf50Q96LR7 162 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 TRGV9Q99603 122 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 NEURL2Q9BR09 285 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 RHPN1-AS1Q9BWJ2 59 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 MAGT1Q9H0U3 335 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 C19orf73Q9NVV2 129 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 PSENENQ9NZ42 101 aa6.15□□□□□ -1.42
NEDD4-210ENST00000513957 MRPL36Q9P0J6 103 aaKnown RBP6.15□□□□□ -1.42
NEDD4-210ENST00000513957 RCL1Q9Y2P8 373 aaKnown RBP6.15□□□□□ -1.42
NEDD4-210ENST00000513957 HELTA6NFD8 242 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 L7N2F9 121 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 MBPP02686 304 aaPredicted RBP6.14□□□□□ -1.43
NEDD4-210ENST00000513957 IL4P05112 153 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 FRMD6-AS1P0C7T7 363 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 EDN2P20800 178 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 AP2S1P53680 142 aaPredicted RBP6.14□□□□□ -1.43
NEDD4-210ENST00000513957 DLK1P80370 383 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 TIGITQ495A1 244 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 FAM90A2PQ658T7 463 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 TMEM144Q7Z5S9 345 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 S100A7AQ86SG5 101 aa6.14□□□□□ -1.43
NEDD4-210ENST00000513957 OR10P1Q8NGE3 313 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms