RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 BEAN1Q3B7T3 259 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 FAM106AQ4KMX7 169 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 BTNL8Q6UX41 500 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 TOMM20LQ6UXN7 152 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 ZNF600Q6ZNG1 722 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 TMEM116Q8NCL8 245 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 OR10P1Q8NGE3 313 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 OR1S2Q8NGQ3 325 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 DYNLRB2Q8TF09 96 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 MCRIP2Q9BUT9 160 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 PEMTQ9UBM1 199 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 MEGF8Q7Z7M0 2845 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 IZUMO1RA6ND01 250 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 A8MWP6 167 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 G3V3Q6 166 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 LGALS9O00182 355 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 APOHP02749 345 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 RLN2P04090 185 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 FOLR2P14207 255 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 DLK1P80370 383 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 NHLH2Q02577 135 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 USF2Q15853 346 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 TMEM182Q6ZP80 229 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 STX12Q86Y82 276 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 ATP6V0BQ99437 205 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 ELOVL1Q9BW60 279 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 SMIM3Q9BZL3 60 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 MLXQ9UH92 298 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 UFC1Q9Y3C8 167 aa7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 PRKDCP78527 4128 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-209ENST00000513818 TRAV30A0A087WSZ9 112 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 A0A1B0GVG6 124 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 TOMM40O96008 361 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 IL4P05112 153 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 PSG1P11464 419 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 CBLN1P23435 193 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 P2RY1P47900 373 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 SULT1A1P50225 295 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 LYZP61626 148 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 CLINT1Q14677 625 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 Q6ZNX1 250 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 THAP8Q8NA92 274 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 OR51G1Q8NGK1 321 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 OR2T35Q8NGX2 323 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 PRR25Q96S07 402 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 PBDC1Q9BVG4 233 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 DAZ1Q9NQZ3 744 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 FBN3Q75N90 2809 aa7.42□□□□□ -1.22
TOPBP1-209ENST00000513818 FXYD6-FXYD2A0A087WZ82 144 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 SCGB2A1O75556 95 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 SCAF4O95104 1147 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 IGLV1-51P01701 117 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 PET100P0DJ07 73 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 RD3LP0DJH9 198 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 RAP2BP61225 183 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 CD300EQ496F6 205 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 ARL6IP6Q8N6S5 226 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 OR5C1Q8NGR4 320 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 THAP6Q8TBB0 222 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 Q8WTZ3 238 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 ST8SIA2Q92186 375 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 C16orf92Q96LL3 132 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 TMEM147Q9BVK8 224 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 UQCC1Q9NVA1 299 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 DOK5Q9P104 306 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 HSPB11Q9Y547 144 aa7.41□□□□□ -1.22
TOPBP1-209ENST00000513818 IGKV3-7A0A075B6H7 116 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 IGHV7-4-1A0A0J9YVY3 117 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 LYL1P12980 280 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 RPL12P30050 165 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 ELLP55199 621 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 YPEL3P61236 119 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 HBG1P69891 147 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 HBG2P69892 147 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 BAXQ07812 192 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 KPRPQ5T749 579 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 CYP2G1PQ6ZSU1 146 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 TMEM144Q7Z5S9 345 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 TMEM61Q8N0U2 210 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 RNF125Q96EQ8 232 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 TRGV9Q99603 122 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 MGST2Q99735 147 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 GINS3Q9BRX5 216 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 GPR61Q9BZJ8 451 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 SLC25A31Q9H0C2 315 aa7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 AURKAIP1Q9NWT8 199 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-209ENST00000513818 WI2-2373I1.2A0A1W2PRP0 233 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 K7EMT4 169 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 CHEK1O14757 476 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 AGPAT2O15120 278 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 C8orf88P0DMB2 117 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 FGF7P21781 194 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 INSL3P51460 131 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 DEFA6Q01524 100 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 EGFEM1PQ0D2K5 195 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 GUCA2BQ16661 112 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 DEFB114Q30KQ6 69 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 BPIFCQ8NFQ6 507 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 METTL26Q96S19 204 aa7.39□□□□□ -1.23
TOPBP1-209ENST00000513818 RNF2Q99496 336 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms