RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TRGV9Q99603 122 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 GGTLC1Q9BX51 225 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 MS4A6AQ9H2W1 248 aa7.18□□□□□ -1.26
RNF4-221ENST00000513643 TRAV6A0A075B6T7 132 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 LOC102724200A0A096LPH7 203 aaPredicted RBP7.17□□□□□ -1.26
RNF4-221ENST00000513643 IGHV3-66A0A0C4DH42 116 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 KIR2DL5BA0A0G2JN68 375 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 KIR2DL5BA0A0G2JPC4 375 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 K7EQG2 157 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 MBPP02686 304 aaPredicted RBP7.17□□□□□ -1.26
RNF4-221ENST00000513643 HNRNPCP07910 306 aaKnown RBP eCLIP7.17□□□□□ -1.264e-7■□□□□ 10.8
RNF4-221ENST00000513643 H2AFB2P0C5Z0 115 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 P2RY1P47900 373 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 RPP30P78346 268 aaKnown RBP7.17□□□□□ -1.26
RNF4-221ENST00000513643 IAH1Q2TAA2 248 aaPredicted RBP7.17□□□□□ -1.26
RNF4-221ENST00000513643 OR8G2PQ6IF36 304 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 WFDC3Q8IUB2 231 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 KIR2DL5AQ8N109 375 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 FAM24BQ8N5W8 94 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 OR51G1Q8NGK1 321 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 KIR2DL5BQ8NHK3 375 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 SEC22CQ9BRL7 303 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 OVOL2Q9BRP0 275 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 TMEM231Q9H6L2 316 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 MAP6D1Q9H9H5 199 aa7.17□□□□□ -1.26
RNF4-221ENST00000513643 SEPSECSQ9HD40 501 aaKnown RBP7.17□□□□□ -1.26
RNF4-221ENST00000513643 RCL1Q9Y2P8 373 aaKnown RBP7.17□□□□□ -1.26
RNF4-221ENST00000513643 FAM240BA0A1B0GVZ2 78 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 C7orf66A4D0T2 115 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 FNDC10F2Z333 226 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 C3orf84H3BNL1 204 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 TSC22D2O75157 780 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 IL4P05112 153 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 SPANXN5Q5MJ07 72 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 MZT2BQ6NZ67 158 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 TMEM182Q6ZP80 229 aaPredicted RBP7.16□□□□□ -1.26
RNF4-221ENST00000513643 Q6ZWC4 215 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 TMEM144Q7Z5S9 345 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 C12orf45Q8N5I9 185 aaPredicted RBP7.16□□□□□ -1.26
RNF4-221ENST00000513643 RNF125Q96EQ8 232 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 GRAMD2BQ96HH9 432 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 SLC35E1Q96K37 410 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 RAB40CQ96S21 281 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 PSENENQ9NZ42 101 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 UBQLN2Q9UHD9 624 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 TP53TG1Q9Y2A0 90 aa7.16□□□□□ -1.26
RNF4-221ENST00000513643 STRAPQ9Y3F4 350 aaKnown RBP7.16□□□□□ -1.26
RNF4-221ENST00000513643 ZFP92A6NM28 416 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 SNRPGP15A8MWD9 76 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 K7EPK0 472 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 UBE2CO00762 179 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 CFDP00746 253 aaPredicted RBP7.15□□□□□ -1.26
RNF4-221ENST00000513643 EIF2B2P49770 351 aaKnown RBP7.15□□□□□ -1.26
RNF4-221ENST00000513643 AP2S1P53680 142 aaPredicted RBP7.15□□□□□ -1.26
RNF4-221ENST00000513643 PAFAH1B2P68402 229 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 ARL16Q0P5N6 197 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 ZNF124Q15973 351 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 C1orf194Q5T5A4 169 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 NRARPQ7Z6K4 114 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 APRG1Q8IVJ8 170 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 GBGT1Q8N5D6 347 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 C17orf77Q96MU5 243 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 MARVELD1Q9BSK0 173 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 RETNQ9HD89 108 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 SLC45A2Q9UMX9 530 aa7.15□□□□□ -1.26
RNF4-221ENST00000513643 HELTA6NFD8 242 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 H3BP45 60 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 SSSCA1O60232 199 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 CCNKO75909 580 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 GIG44P09565 113 aaPredicted RBP7.14□□□□□ -1.27
RNF4-221ENST00000513643 PLP1P60201 277 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 DLK1P80370 383 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 ACOT7LQ6ZUV0 252 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 MUC7Q8TAX7 377 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 C2orf50Q96LR7 162 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 RABAC1Q9UI14 185 aa7.14□□□□□ -1.27
RNF4-221ENST00000513643 IGKV3-7A0A075B6H7 116 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 SOCS3O14543 225 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 CCSO14618 274 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 DEDDO75618 318 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 FABP1P07148 127 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 NUP62P37198 522 aaPredicted RBP7.13□□□□□ -1.27
RNF4-221ENST00000513643 TFPI2P48307 235 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 APOC4P55056 127 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 DEFB131AP59861 70 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 CASC10Q5T4H9 136 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 RNF183Q96D59 192 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 NARS2Q96I59 477 aaKnown RBP7.13□□□□□ -1.27
RNF4-221ENST00000513643 GGACTQ9BVM4 153 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 GSKIPQ9P0R6 139 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 HYDINQ4G0P3 5121 aa7.13□□□□□ -1.27
RNF4-221ENST00000513643 AGRNO00468 2067 aa7.12□□□□□ -1.27
RNF4-221ENST00000513643 DNASE2O00115 360 aaPredicted RBP7.12□□□□□ -1.27
RNF4-221ENST00000513643 PRAF2O60831 178 aa7.12□□□□□ -1.27
RNF4-221ENST00000513643 METTL15P1P0C7V9 234 aa7.12□□□□□ -1.27
RNF4-221ENST00000513643 GATA2P23769 480 aaPredicted RBP7.12□□□□□ -1.27
RNF4-221ENST00000513643 SIGLEC15Q6ZMC9 328 aa7.12□□□□□ -1.27
RNF4-221ENST00000513643 TRPT1Q86TN4 253 aaKnown RBP7.12□□□□□ -1.27
RNF4-221ENST00000513643 CSTL1Q9H114 145 aa7.12□□□□□ -1.27
RNF4-221ENST00000513643 NPVFQ9HCQ7 196 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms