RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CYSLTR1Q9Y271 337 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 PLXND1Q9Y4D7 1925 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 FOXH1O75593 365 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 IGLL1P15814 213 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 ANOS1P23352 680 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 RPL15P61313 204 aaKnown RBP9.31□□□□□ -0.92
TCOF1-211ENST00000513346 LY6DQ14210 128 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 TMEM30BQ3MIR4 351 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 C9orf106Q8NAJ2 232 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 LRRK1Q38SD2 2015 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 FAM231BA6NCW3 169 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 IGKV1D-33P01593 117 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 IGKV1-33P01594 117 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 PYYP10082 97 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 LHX2P50458 406 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 PIMREGQ9BSJ6 248 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 DCTN5Q9BTE1 182 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 APOMO95445 188 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 FCGR2BP31994 310 aaPredicted RBP9.3□□□□□ -0.92
TCOF1-211ENST00000513346 DUTP33316 252 aaKnown RBP9.3□□□□□ -0.92
TCOF1-211ENST00000513346 ZIC4Q8N9L1 334 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 ZNRF1Q8ND25 227 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 IFI27L1Q96BM0 104 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 FASNP49327 2511 aaKnown RBP9.3□□□□□ -0.92
TCOF1-211ENST00000513346 REG1AP05451 166 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 OR9G1Q8NH87 305 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 OSR1Q8TAX0 266 aaPredicted RBP9.3□□□□□ -0.92
TCOF1-211ENST00000513346 Q9H3A6 140 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 CSPG4Q6UVK1 2322 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 C15orf62A8K5M9 175 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 E9PLN8 166 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 IGHV1-2P23083 117 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 FGFBP3Q8TAT2 258 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 RABAC1Q9UI14 185 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 ABCA1O95477 2261 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 YPEL1O60688 119 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 NTF4P34130 210 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 ZNF585BQ52M93 769 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 BCL6BQ8N143 479 aaPredicted RBP9.3□□□□□ -0.92
TCOF1-211ENST00000513346 CIARTQ8N365 385 aaPredicted RBP9.3□□□□□ -0.92
TCOF1-211ENST00000513346 OR5AN1Q8NGI8 311 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 YPEL2Q96QA6 119 aa9.3□□□□□ -0.92
TCOF1-211ENST00000513346 LOC105371242A0A075B767 164 aa9.29□□□□□ -0.92
TCOF1-211ENST00000513346 K7EP13 123 aa9.29□□□□□ -0.92
TCOF1-211ENST00000513346 FAM71F2Q6NXP2 309 aa9.29□□□□□ -0.92
TCOF1-211ENST00000513346 IGHV2-70DA0A0C4DH43 119 aa9.29□□□□□ -0.92
TCOF1-211ENST00000513346 EMP1P54849 157 aa9.29□□□□□ -0.92
TCOF1-211ENST00000513346 CD69Q07108 199 aa9.29□□□□□ -0.92
TCOF1-211ENST00000513346 PSG7Q13046 419 aa9.29□□□□□ -0.92
TCOF1-211ENST00000513346 NOTCH3Q9UM47 2321 aa9.29□□□□□ -0.92
TCOF1-211ENST00000513346 NPIPB11E5RHQ5 1161 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 TMEM262E9PQX1 116 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 UPK2O00526 184 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 PF4V1P10720 104 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 PEAR1Q5VY43 1037 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-211ENST00000513346 ZNF114Q8NC26 417 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 KLK15Q9H2R5 256 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 FER1L5A0AVI2 2057 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 H3BRM9 83 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 MEF2CQ06413 473 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-211ENST00000513346 BSPH1Q075Z2 132 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 IGKV1-6A0A0C4DH72 117 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 KBTBD11-OT1A0A1B0GTJ5 212 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 TMEM238C9JI98 176 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 LOXL3P58215 753 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 Q6ZVH6 145 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 FOXF2Q12947 444 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 TDRG1Q3Y452 100 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 MORN2Q502X0 79 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 TMEM78Q5T7P6 136 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 PRSS33Q8NF86 280 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 OR4A5Q8NH83 315 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 DYNLRB2Q8TF09 96 aa9.28□□□□□ -0.92
TCOF1-211ENST00000513346 MLNRO43193 412 aa9.27□□□□□ -0.92
TCOF1-211ENST00000513346 DPM2O94777 84 aa9.27□□□□□ -0.92
TCOF1-211ENST00000513346 OTORQ9NRC9 128 aa9.27□□□□□ -0.92
TCOF1-211ENST00000513346 DNAH12Q6ZR08 3092 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 CADP27708 2225 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 TRAV5A0A0B4J249 113 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 IGLC7A0M8Q6 106 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 J3KRW8 73 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 SLC25A48Q6ZT89 311 aaKnown RBP9.27□□□□□ -0.93
TCOF1-211ENST00000513346 COQ2Q96H96 371 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 PINLYPA6NC86 204 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 C9orf118A6NHY6 69 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 NUPR1O60356 82 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 LEPP41159 167 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 PRCDQ00LT1 54 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 CELA3BP08861 270 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 PSG3Q16557 428 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 PLA2G2CQ5R387 149 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 FAM201AQ5SY85 155 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 TEX45Q8NA69 505 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 CCL19Q99731 98 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 SCRT1Q9BWW7 348 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 V9GYV3 84 aa9.27□□□□□ -0.93
TCOF1-211ENST00000513346 ZFYVE26Q68DK2 2539 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 225.7 ms