RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF600Q6ZNG1 722 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 TMEM182Q6ZP80 229 aaPredicted RBP9.62□□□□□ -0.87
PDPN-210ENST00000513143 C3orf56Q8N813 242 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 DPF1Q92782 380 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 RAX2Q96IS3 184 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 GINS3Q9BRX5 216 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 ZNF471Q9BX82 626 aaPredicted RBP9.62□□□□□ -0.87
PDPN-210ENST00000513143 C17orf112F2Z3M2 114 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 J3QL48 77 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 NDUFA4O00483 81 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 LINC00869P0C866 280 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 ZP3P21754 424 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 GATA2P23769 480 aaPredicted RBP9.61□□□□□ -0.87
PDPN-210ENST00000513143 ATP6V0CP27449 155 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 EIF5AP63241 154 aaKnown RBP9.61□□□□□ -0.87
PDPN-210ENST00000513143 RPEL1Q2QD12 228 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 SHISA2Q6UWI4 295 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 SLC51BQ86UW2 128 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 GPHB5Q86YW7 130 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 ZNF709Q8N972 641 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 HSD17B11Q8NBQ5 300 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 STOML3Q8TAV4 291 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 Q8WTZ3 238 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 MDFIQ99750 246 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 RSG1Q9BU20 258 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 TIMM9Q9Y5J7 89 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 PUS1Q9Y606 427 aaKnown RBP eCLIP9.61□□□□□ -0.87
PDPN-210ENST00000513143 WNK1Q9H4A3 2382 aa9.61□□□□□ -0.87
PDPN-210ENST00000513143 IGHV3-35A0A0C4DH35 117 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 WI2-2373I1.2A0A1W2PRP0 233 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 CFDP00746 253 aaPredicted RBP9.6□□□□□ -0.87
PDPN-210ENST00000513143 HOXD3P31249 432 aaPredicted RBP9.6□□□□□ -0.87
PDPN-210ENST00000513143 FAM106AQ4KMX7 169 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 MIC13Q5XKP0 118 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 TOMM20LQ6UXN7 152 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 BAP18Q8IXM2 172 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 BPIFCQ8NFQ6 507 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 OR51G1Q8NGK1 321 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 GNPNAT1Q96EK6 184 aaPredicted RBP9.6□□□□□ -0.87
PDPN-210ENST00000513143 DUX3Q96PT4 197 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 PSMG3Q9BT73 122 aaPredicted RBP9.6□□□□□ -0.87
PDPN-210ENST00000513143 KCNIP2Q9NS61 270 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 RFNGQ9Y644 331 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 PXMP4Q9Y6I8 212 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 STAB1Q9NY15 2570 aa9.6□□□□□ -0.87
PDPN-210ENST00000513143 WIPF1O43516 503 aa9.59□□□□□ -0.87
PDPN-210ENST00000513143 TPT1P13693 172 aaKnown RBP9.59□□□□□ -0.87
PDPN-210ENST00000513143 MYCNOSP40205 109 aa9.59□□□□□ -0.87
PDPN-210ENST00000513143 PLP1P60201 277 aa9.59□□□□□ -0.87
PDPN-210ENST00000513143 B2MP61769 119 aa9.59□□□□□ -0.87
PDPN-210ENST00000513143 KLF5Q13887 457 aaPredicted RBP9.59□□□□□ -0.87
PDPN-210ENST00000513143 STPG3Q8N7X2 389 aa9.59□□□□□ -0.87
PDPN-210ENST00000513143 SH3BGRL3Q9H299 93 aa9.59□□□□□ -0.87
PDPN-210ENST00000513143 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
PDPN-210ENST00000513143 LGALS9O00182 355 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 YIF1AO95070 293 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 TSPAN15O95858 294 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 IL4P05112 153 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 SPP1P10451 314 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 SLURP1P55000 103 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 PXDC1Q5TGL8 231 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 REC114Q7Z4M0 266 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 C1QL4Q86Z23 238 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 OR4F17Q8NGA8 305 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 OR2G3Q8NGZ4 309 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 TMEM190Q8WZ59 177 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 ST8SIA2Q92186 375 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 RNF125Q96EQ8 232 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 RCC1LQ96I51 464 aaKnown RBP9.58□□□□□ -0.88
PDPN-210ENST00000513143 OR4F4Q96R69 305 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 SLC25A32Q9H2D1 315 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 SLC39A9Q9NUM3 307 aa9.58□□□□□ -0.88
PDPN-210ENST00000513143 SEC11BP0C7V7 166 aa9.57□□□□□ -0.88
PDPN-210ENST00000513143 SYNJ2BPP57105 145 aa9.57□□□□□ -0.88
PDPN-210ENST00000513143 LYZP61626 148 aa9.57□□□□□ -0.88
PDPN-210ENST00000513143 SERF2P84101 59 aa9.57□□□□□ -0.88
PDPN-210ENST00000513143 USF2Q15853 346 aaPredicted RBP9.57□□□□□ -0.88
PDPN-210ENST00000513143 KRTAP21-3Q3LHN1 58 aa9.57□□□□□ -0.88
PDPN-210ENST00000513143 FFAR4Q5NUL3 377 aa9.57□□□□□ -0.88
PDPN-210ENST00000513143 Q6ZRG5 221 aa9.57□□□□□ -0.88
PDPN-210ENST00000513143 DLX4Q92988 240 aaPredicted RBP9.57□□□□□ -0.88
PDPN-210ENST00000513143 ZNF320A2RRD8 509 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 A8MWP6 167 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 K7EMT4 169 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 HYPMO75409 117 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 ORM2P19652 201 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 C20orf24Q9BUV8 137 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 PBDC1Q9BVG4 233 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 MRPL27Q9P0M9 148 aaKnown RBP9.56□□□□□ -0.88
PDPN-210ENST00000513143 UFC1Q9Y3C8 167 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 IGHV3OR16-8A0A075B7F1 116 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
PDPN-210ENST00000513143 PF4P02776 101 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 ELLP55199 621 aaPredicted RBP9.56□□□□□ -0.88
PDPN-210ENST00000513143 GCSAMLQ5JQS6 135 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 EIF5AL1Q6IS14 154 aaKnown RBP9.56□□□□□ -0.88
PDPN-210ENST00000513143 PATE2Q6UY27 113 aa9.56□□□□□ -0.88
PDPN-210ENST00000513143 OR1L4Q8NGR5 311 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms