RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 CLDN12P56749 244 aa5.98□□□□□ -1.45
CLCN3-208ENST00000512813 YPEL3P61236 119 aaPredicted RBP5.98□□□□□ -1.45
CLCN3-208ENST00000512813 DAZ2Q13117 558 aaKnown RBP5.98□□□□□ -1.45
CLCN3-208ENST00000512813 RAB11BQ15907 218 aa5.98□□□□□ -1.45
CLCN3-208ENST00000512813 C4orf48Q5BLP8 95 aa5.98□□□□□ -1.45
CLCN3-208ENST00000512813 ZBTB34Q8NCN2 500 aa5.98□□□□□ -1.45
CLCN3-208ENST00000512813 OR1S2Q8NGQ3 325 aa5.98□□□□□ -1.45
CLCN3-208ENST00000512813 PHYHIPQ92561 330 aa5.98□□□□□ -1.45
CLCN3-208ENST00000512813 AMBNQ9NP70 447 aa5.98□□□□□ -1.45
CLCN3-208ENST00000512813 MRPS18AQ9NVS2 196 aaKnown RBP5.98□□□□□ -1.45
CLCN3-208ENST00000512813 PRO0255Q9UI72 69 aa5.98□□□□□ -1.45
CLCN3-208ENST00000512813 OAZ3Q9UMX2 235 aa5.98□□□□□ -1.45
CLCN3-208ENST00000512813 TMEM235A6NFC5 223 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 ERICH4A6NGS2 130 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 KRASP01116 189 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 IGLC1P0CG04 106 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 GABRB1P18505 474 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 GATA2P23769 480 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-208ENST00000512813 SRIP30626 198 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 CRYBA4P53673 196 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 ERHP84090 104 aaKnown RBP5.97□□□□□ -1.45
CLCN3-208ENST00000512813 ZIK1Q3SY52 487 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-208ENST00000512813 HES5Q5TA89 166 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 CCDC28AQ8IWP9 274 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 Q8N976 141 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 BPIFB6Q8NFQ5 453 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 OR51H1Q8NH63 302 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 SECTM1Q8WVN6 248 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 TSC22D3Q99576 134 aa5.97□□□□□ -1.45
CLCN3-208ENST00000512813 SLC25A39Q9BZJ4 359 aaPredicted RBP5.97□□□□□ -1.45
CLCN3-208ENST00000512813 RNF222A6NCQ9 220 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 PRAF2O60831 178 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 ZNF182P17025 639 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-208ENST00000512813 DTYMKP23919 212 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 G6PCP35575 357 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 TALDO1P37837 337 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 OPRK1P41145 380 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 SLAQ13239 276 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 GAMTQ14353 236 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 SPARTQ8N0X7 666 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 THAP8Q8NA92 274 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 BAALCQ8WXS3 180 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 SLC7A6OSQ96CW6 309 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-208ENST00000512813 C16orf92Q96LL3 132 aa5.96□□□□□ -1.46
CLCN3-208ENST00000512813 FGF20Q9NP95 211 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-208ENST00000512813 K7EQD1 137 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 SLC17A2O00624 439 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 HIST1H1DP16402 221 aaKnown RBP5.95□□□□□ -1.46
CLCN3-208ENST00000512813 SNCAP37840 140 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 MEOX2P50222 304 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 ARPC4P59998 168 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 AADACL3Q5VUY0 350 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 CNIH2Q6PI25 160 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 REG3GQ6UW15 175 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 SLC24A4Q8NFF2 622 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 C20orf144Q9BQM9 153 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 DAPK2Q9UIK4 370 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 VAX2Q9UIW0 290 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 FUT9Q9Y231 359 aa5.95□□□□□ -1.46
CLCN3-208ENST00000512813 A0A075B6Q4 140 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 PNMA8CA0A1B0GUJ8 204 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 OR5AC1P0C628 307 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 GADD45AP24522 165 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 F2RP25116 425 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 OR10J1P30954 320 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 RPL5P46777 297 aaKnown RBP5.94□□□□□ -1.46
CLCN3-208ENST00000512813 HSPA13P48723 471 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 SCAND1P57086 179 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 SUPT4H1P63272 117 aaKnown RBP5.94□□□□□ -1.46
CLCN3-208ENST00000512813 MLANAQ16655 118 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 C1orf194Q5T5A4 169 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 MS4A15Q8N5U1 240 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 OR10R2Q8NGX6 335 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 BLNKQ8WV28 456 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 ST6GAL2Q96JF0 529 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 C8orf49Q96NF6 230 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 PFDN2Q9UHV9 154 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 HHLA3Q9XRX5 114 aa5.94□□□□□ -1.46
CLCN3-208ENST00000512813 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-208ENST00000512813 TCRBV3S1A0A5B6 114 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 INS-IGF2F8WCM5 200 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 TOMM40O96008 361 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 CD1AP06126 327 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 RNASE2P10153 161 aaKnown RBP5.93□□□□□ -1.46
CLCN3-208ENST00000512813 PSMB9P28065 219 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 HSPE1P61604 102 aaKnown RBP5.93□□□□□ -1.46
CLCN3-208ENST00000512813 SRSF3P84103 164 aaKnown RBP5.93□□□□□ -1.46
CLCN3-208ENST00000512813 OR2F1Q13607 317 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 FLOT2Q14254 428 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 INSL4Q14641 139 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 OR8G2PQ6IF36 304 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 ZNF818PQ6ZRF7 136 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 SPATA24Q86W54 205 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 ZNF485Q8NCK3 441 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 FCAMRQ8WWV6 532 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 PLGRKTQ9HBL7 147 aa5.93□□□□□ -1.46
CLCN3-208ENST00000512813 ARGLU1Q9NWB6 273 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-208ENST00000512813 TRGV1A0A0A0MS02 117 aa5.92□□□□□ -1.46
CLCN3-208ENST00000512813 LPAR6P43657 344 aa5.92□□□□□ -1.46
CLCN3-208ENST00000512813 RND2P52198 227 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms